Deep learning for automated epileptiform discharge detection from scalp EEG: A systematic review.

automation deep learning electroencephalogram epilepsy interictal epileptiform discharges

Journal

Journal of neural engineering
ISSN: 1741-2552
Titre abrégé: J Neural Eng
Pays: England
ID NLM: 101217933

Informations de publication

Date de publication:
19 10 2022
Historique:
received: 01 09 2022
accepted: 29 09 2022
pubmed: 30 9 2022
medline: 21 10 2022
entrez: 29 9 2022
Statut: epublish

Résumé

Automated interictal epileptiform discharge (IED) detection has been widely studied, with machine learning methods at the forefront in recent years. As computational resources become more accessible, researchers have applied deep learning (DL) to IED detection with promising results. This systematic review aims to provide an overview of the current DL approaches to automated IED detection from scalp electroencephalography (EEG) and establish recommendations for the clinical research community. We conduct a systematic review according to the PRISMA guidelines. We searched for studies published between 2012 and 2022 implementing DL for automating IED detection from scalp EEG in major medical and engineering databases. We highlight trends and formulate recommendations for the research community by analyzing various aspects: data properties, preprocessing methods, DL architectures, evaluation metrics and results, and reproducibility. The search yielded 66 studies, and 23 met our inclusion criteria. There were two main DL networks, convolutional neural networks in 14 studies and long short-term memory networks in three studies. A hybrid approach combining a hidden Markov model with an autoencoder was employed in one study. Graph convolutional network was seen in one study, which considered a montage as a graph. All DL models involved supervised learning. The median number of layers was 9 (IQR: 5-21). The median number of IEDs was 11 631 (IQR: 2663-16 402). Only six studies acquired data from multiple clinical centers. AUC was the most reported metric (median: 0.94; IQR: 0.94-0.96). The application of DL to IED detection is still limited and lacks standardization in data collection, multi-center testing, and reporting of clinically relevant metrics (i.e. F1, AUCPR, and false-positive/minute). However, the performance is promising, suggesting that DL might be a helpful approach. Further testing on multiple datasets from different clinical centers is required to confirm the generalizability of these methods.

Identifiants

pubmed: 36174541
doi: 10.1088/1741-2552/ac9644
doi:

Types de publication

Systematic Review Journal Article Review Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Informations de copyright

© 2022 IOP Publishing Ltd.

Auteurs

Duong Nhu (D)

Department of Data Science and AI, Faculty of Information Technology, Monash University, Clayton, Victoria, Australia.

Mubeen Janmohamed (M)

Department of Neuroscience, Central Clinical School, Monash University, Melbourne, Victoria, Australia.
Department of Neurology, Alfred Health, Melbourne, Victoria, Australia.
Department of Neurology, The Royal Melbourne Hospital, Melbourne, Victoria, Australia.

Ana Antonic-Baker (A)

Department of Neuroscience, Central Clinical School, Monash University, Melbourne, Victoria, Australia.

Piero Perucca (P)

Department of Neuroscience, Central Clinical School, Monash University, Melbourne, Victoria, Australia.
Department of Neurology, Alfred Health, Melbourne, Victoria, Australia.
Department of Neurology, The Royal Melbourne Hospital, Melbourne, Victoria, Australia.
Department of Medicine, Austin Health, The University of Melbourne, Melbourne, Victoria, Australia.
Bladin-Berkovic Comprehensive Epilepsy Program, Department of Neurology, Austin Health, Melbourne, Victoria, Australia.

Terence J O'Brien (TJ)

Department of Neuroscience, Central Clinical School, Monash University, Melbourne, Victoria, Australia.
Department of Neurology, Alfred Health, Melbourne, Victoria, Australia.
Department of Neurology, The Royal Melbourne Hospital, Melbourne, Victoria, Australia.

Amanda K Gilligan (AK)

Neurosciences Clinical Institute, Epworth Healthcare, Melbourne, Victoria, Australia.
Department of Neurology, Austin Health, Melbourne, Victoria, Australia.

Patrick Kwan (P)

Department of Neuroscience, Central Clinical School, Monash University, Melbourne, Victoria, Australia.
Department of Neurology, Alfred Health, Melbourne, Victoria, Australia.
Department of Neurology, The Royal Melbourne Hospital, Melbourne, Victoria, Australia.

Chang Wei Tan (CW)

Department of Data Science and AI, Faculty of Information Technology, Monash University, Clayton, Victoria, Australia.

Levin Kuhlmann (L)

Department of Data Science and AI, Faculty of Information Technology, Monash University, Clayton, Victoria, Australia.

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