The Catalan Surveillance Network of SARS-CoV-2 in Sewage: design, implementation, and performance.


Journal

Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288

Informations de publication

Date de publication:
06 10 2022
Historique:
received: 07 04 2022
accepted: 21 09 2022
entrez: 6 10 2022
pubmed: 7 10 2022
medline: 12 10 2022
Statut: epublish

Résumé

Wastewater-based epidemiology has shown to be an efficient tool to track the circulation of SARS-CoV-2 in communities assisted by wastewater treatment plants (WWTPs). The challenge comes when this approach is employed to help Health authorities in their decision-making. Here, we describe the roadmap for the design and deployment of SARSAIGUA, the Catalan Surveillance Network of SARS-CoV-2 in Sewage. The network monitors, weekly or biweekly, 56 WWTPs evenly distributed across the territory and serving 6 M inhabitants (80% of the Catalan population). Each week, samples from 45 WWTPs are collected, analyzed, results reported to Health authorities, and finally published within less than 72 h in an online dashboard ( https://sarsaigua.icra.cat ). After 20 months of monitoring (July 20-March 22), the standardized viral load (gene copies/day) in all the WWTPs monitored fairly matched the cumulative number of COVID-19 cases along the successive pandemic waves, showing a good fit with the diagnosed cases in the served municipalities (Spearman Rho = 0.69). Here we describe the roadmap of the design and deployment of SARSAIGUA while providing several open-access tools for the management and visualization of the surveillance data.

Identifiants

pubmed: 36202959
doi: 10.1038/s41598-022-20957-3
pii: 10.1038/s41598-022-20957-3
pmc: PMC9537440
doi:

Substances chimiques

RNA, Viral 0
Sewage 0
Waste Water 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

16704

Informations de copyright

© 2022. The Author(s).

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Auteurs

Laura Guerrero-Latorre (L)

Catalan Institute for Water Research (ICRA), Emili Grahit 101, 17003, Girona, Catalonia, Spain.
Universitat de Girona, 17003, Girona, Catalonia, Spain.

Neus Collado (N)

Catalan Institute for Water Research (ICRA), Emili Grahit 101, 17003, Girona, Catalonia, Spain.
Universitat de Girona, 17003, Girona, Catalonia, Spain.

Nerea Abasolo (N)

Centre for Omic Sciences (COS), Joint Unit Universitat Rovira i Virgili-EURECAT, Unique Scientific and Technical Infrastructures (ICTS), Eurecat, Centre Tecnològic de Catalunya, Avinguda Universitat 1, 43204, Reus, Catalonia, Spain.

Gabriel Anzaldi (G)

Applied Artificial Intelligence Technological Unit, Eurecat, Centre Tecnològic de Catalunya, Science and Technology Park, H3, 25003, Lleida, Catalonia, Spain.

Sílvia Bofill-Mas (S)

Laboratory of Viruses Contaminants of Water and Food, Department of Genetics, Microbiology and Statistics, School of Biology, University of Barcelona, 08028, Barcelona, Catalonia, Spain.

Albert Bosch (A)

Enteric Virus Laboratory, Section of Microbiology, Virology and Biotechnology, Department of Genetics, Microbiology and Statistics, School of Biology, University of Barcelona, 08028, Barcelona, Catalonia, Spain.
Research Institute of Nutrition and Food Safety (INSA), University of Barcelona, 08921, Santa Coloma de Gramenet, Catalonia, Spain.

Lluís Bosch (L)

Catalan Institute for Water Research (ICRA), Emili Grahit 101, 17003, Girona, Catalonia, Spain.
Universitat de Girona, 17003, Girona, Catalonia, Spain.

Sílvia Busquets (S)

Catalan Institute for Water Research (ICRA), Emili Grahit 101, 17003, Girona, Catalonia, Spain.
Universitat de Girona, 17003, Girona, Catalonia, Spain.

Antoni Caimari (A)

Biotechnology Area, Eurecat, Centre Tecnològic de Catalunya, Avinguda Universitat 1, 43204, Reus, Catalonia, Spain.

Núria Canela (N)

Centre for Omic Sciences (COS), Joint Unit Universitat Rovira i Virgili-EURECAT, Unique Scientific and Technical Infrastructures (ICTS), Eurecat, Centre Tecnològic de Catalunya, Avinguda Universitat 1, 43204, Reus, Catalonia, Spain.

Albert Carcereny (A)

Enteric Virus Laboratory, Section of Microbiology, Virology and Biotechnology, Department of Genetics, Microbiology and Statistics, School of Biology, University of Barcelona, 08028, Barcelona, Catalonia, Spain.
Research Institute of Nutrition and Food Safety (INSA), University of Barcelona, 08921, Santa Coloma de Gramenet, Catalonia, Spain.

Carme Chacón (C)

Public Health Agency of Catalonia (ASPCAT), Roc Boronat 81-95, 08005, Barcelona, Catalonia, Spain.

Pilar Ciruela (P)

Public Health Agency of Catalonia (ASPCAT), Roc Boronat 81-95, 08005, Barcelona, Catalonia, Spain.

Irene Corbella (I)

Public Health Agency of Catalonia (ASPCAT), Roc Boronat 81-95, 08005, Barcelona, Catalonia, Spain.

Xavier Domingo (X)

Applied Artificial Intelligence Technological Unit, Eurecat, Centre Tecnològic de Catalunya, Science and Technology Park, H3, 25003, Lleida, Catalonia, Spain.

Xavier Escoté (X)

Technological Unit of Nutrition and Health, Eurecat, Centre Tecnològic de Catalunya, Avinguda Universitat 1, 43204, Reus, Catalonia, Spain.

Yaimara Espiñeira (Y)

Applied Artificial Intelligence Technological Unit, Eurecat, Centre Tecnològic de Catalunya, Science and Technology Park, H3, 25003, Lleida, Catalonia, Spain.

Eva Forés (E)

Laboratory of Viruses Contaminants of Water and Food, Department of Genetics, Microbiology and Statistics, School of Biology, University of Barcelona, 08028, Barcelona, Catalonia, Spain.

Isabel Gandullo-Sarró (I)

Catalan Water Agency (ACA), Provença, 260, 08008, Barcelona, Catalonia, Spain.

David Garcia-Pedemonte (D)

Enteric Virus Laboratory, Section of Microbiology, Virology and Biotechnology, Department of Genetics, Microbiology and Statistics, School of Biology, University of Barcelona, 08028, Barcelona, Catalonia, Spain.
Research Institute of Nutrition and Food Safety (INSA), University of Barcelona, 08921, Santa Coloma de Gramenet, Catalonia, Spain.

Rosina Girones (R)

Laboratory of Viruses Contaminants of Water and Food, Department of Genetics, Microbiology and Statistics, School of Biology, University of Barcelona, 08028, Barcelona, Catalonia, Spain.

Susana Guix (S)

Enteric Virus Laboratory, Section of Microbiology, Virology and Biotechnology, Department of Genetics, Microbiology and Statistics, School of Biology, University of Barcelona, 08028, Barcelona, Catalonia, Spain.
Research Institute of Nutrition and Food Safety (INSA), University of Barcelona, 08921, Santa Coloma de Gramenet, Catalonia, Spain.

Ayalkibet Hundesa (A)

Laboratory of Viruses Contaminants of Water and Food, Department of Genetics, Microbiology and Statistics, School of Biology, University of Barcelona, 08028, Barcelona, Catalonia, Spain.

Marta Itarte (M)

Laboratory of Viruses Contaminants of Water and Food, Department of Genetics, Microbiology and Statistics, School of Biology, University of Barcelona, 08028, Barcelona, Catalonia, Spain.

Roger Mariné-Casadó (R)

Technological Unit of Nutrition and Health, Eurecat, Centre Tecnològic de Catalunya, Avinguda Universitat 1, 43204, Reus, Catalonia, Spain.

Anna Martínez (A)

Public Health Agency of Catalonia (ASPCAT), Roc Boronat 81-95, 08005, Barcelona, Catalonia, Spain.

Sandra Martínez-Puchol (S)

Laboratory of Viruses Contaminants of Water and Food, Department of Genetics, Microbiology and Statistics, School of Biology, University of Barcelona, 08028, Barcelona, Catalonia, Spain.

Anna Mas-Capdevila (A)

Technological Unit of Nutrition and Health, Eurecat, Centre Tecnològic de Catalunya, Avinguda Universitat 1, 43204, Reus, Catalonia, Spain.

Cristina Mejías-Molina (C)

Laboratory of Viruses Contaminants of Water and Food, Department of Genetics, Microbiology and Statistics, School of Biology, University of Barcelona, 08028, Barcelona, Catalonia, Spain.

Marc Moliner I Rafa (MMI)

Catalan Water Agency (ACA), Provença, 260, 08008, Barcelona, Catalonia, Spain.

Antoni Munné (A)

Catalan Water Agency (ACA), Provença, 260, 08008, Barcelona, Catalonia, Spain.

Rosa Maria Pintó (RM)

Enteric Virus Laboratory, Section of Microbiology, Virology and Biotechnology, Department of Genetics, Microbiology and Statistics, School of Biology, University of Barcelona, 08028, Barcelona, Catalonia, Spain.
Research Institute of Nutrition and Food Safety (INSA), University of Barcelona, 08921, Santa Coloma de Gramenet, Catalonia, Spain.

Josep Pueyo-Ros (J)

Catalan Institute for Water Research (ICRA), Emili Grahit 101, 17003, Girona, Catalonia, Spain.
Universitat de Girona, 17003, Girona, Catalonia, Spain.

Jordi Robusté-Cartró (J)

Catalan Water Agency (ACA), Provença, 260, 08008, Barcelona, Catalonia, Spain.

Marta Rusiñol (M)

Institute of Environmental Assessment & Water Research (IDAEA), CSIC, Barcelona, Catalonia, Spain.

Robert Sanfeliu (R)

Applied Artificial Intelligence Technological Unit, Eurecat, Centre Tecnològic de Catalunya, Science and Technology Park, H3, 25003, Lleida, Catalonia, Spain.

Joan Teichenné (J)

Technological Unit of Nutrition and Health, Eurecat, Centre Tecnològic de Catalunya, Avinguda Universitat 1, 43204, Reus, Catalonia, Spain.

Helena Torrell (H)

Centre for Omic Sciences (COS), Joint Unit Universitat Rovira i Virgili-EURECAT, Unique Scientific and Technical Infrastructures (ICTS), Eurecat, Centre Tecnològic de Catalunya, Avinguda Universitat 1, 43204, Reus, Catalonia, Spain.

Lluís Corominas (L)

Catalan Institute for Water Research (ICRA), Emili Grahit 101, 17003, Girona, Catalonia, Spain.
Universitat de Girona, 17003, Girona, Catalonia, Spain.

Carles M Borrego (CM)

Catalan Institute for Water Research (ICRA), Emili Grahit 101, 17003, Girona, Catalonia, Spain. cborrego@icra.cat.
Group of Molecular Microbial Ecology, Institute of Aquatic Ecology, University of Girona, 17003, Girona, Catalonia, Spain. cborrego@icra.cat.

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