Path analysis: A method to estimate altered pathways in time-varying graphs of neuroimaging data.

Brain graph Functional connectivity Gaussian graphical model Joint estimation Resting-state fMRI Schizophrenia

Journal

Network neuroscience (Cambridge, Mass.)
ISSN: 2472-1751
Titre abrégé: Netw Neurosci
Pays: United States
ID NLM: 101719149

Informations de publication

Date de publication:
Jul 2022
Historique:
received: 03 06 2021
accepted: 23 03 2022
entrez: 7 10 2022
pubmed: 8 10 2022
medline: 8 10 2022
Statut: epublish

Résumé

Graph-theoretical methods have been widely used to study human brain networks in psychiatric disorders. However, the focus has primarily been on global graphic metrics with little attention to the information contained in paths connecting brain regions. Details of disruption of these paths may be highly informative for understanding disease mechanisms. To detect the absence or addition of multistep paths in the patient group, we provide an algorithm estimating edges that contribute to these paths with reference to the control group. We next examine where pairs of nodes were connected through paths in both groups by using a covariance decomposition method. We apply our method to study resting-state fMRI data in schizophrenia versus controls. Results show several disconnectors in schizophrenia within and between functional domains, particularly within the default mode and cognitive control networks. Additionally, we identify new edges generating additional paths. Moreover, although paths exist in both groups, these paths take unique trajectories and have a significant contribution to the decomposition. The proposed path analysis provides a way to characterize individuals by evaluating changes in paths, rather than just focusing on the pairwise relationships. Our results show promise for identifying path-based metrics in neuroimaging data.

Identifiants

pubmed: 36204419
doi: 10.1162/netn_a_00247
pii: netn_a_00247
pmc: PMC9531579
doi:

Types de publication

Journal Article

Langues

eng

Pagination

634-664

Informations de copyright

© 2022 Massachusetts Institute of Technology.

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Auteurs

Haleh Falakshahi (H)

Tri-Institutional Center for Translational Research in Neuroimaging and Data Science (TReNDS), Georgia State University, Georgia Institute of Technology, and Emory University, Atlanta, GA, USA.
School of Electrical and Computer Engineering, Georgia Institute of Technology, Atlanta, GA, USA.

Hooman Rokham (H)

Tri-Institutional Center for Translational Research in Neuroimaging and Data Science (TReNDS), Georgia State University, Georgia Institute of Technology, and Emory University, Atlanta, GA, USA.
School of Electrical and Computer Engineering, Georgia Institute of Technology, Atlanta, GA, USA.

Zening Fu (Z)

Tri-Institutional Center for Translational Research in Neuroimaging and Data Science (TReNDS), Georgia State University, Georgia Institute of Technology, and Emory University, Atlanta, GA, USA.

Armin Iraji (A)

Tri-Institutional Center for Translational Research in Neuroimaging and Data Science (TReNDS), Georgia State University, Georgia Institute of Technology, and Emory University, Atlanta, GA, USA.

Daniel H Mathalon (DH)

Department of Psychiatry, University of California, San Francisco, CA, USA.
San Francisco VA Medical Center, San Francisco, CA, USA.

Judith M Ford (JM)

Department of Psychiatry, University of California, San Francisco, CA, USA.
San Francisco VA Medical Center, San Francisco, CA, USA.

Bryon A Mueller (BA)

Department of Psychiatry, University of Minnesota, Minneapolis, MN, USA.

Adrian Preda (A)

Department of Psychiatry and Human Behavior, University of California Irvine, Irvine, CA, USA.

Theo G M van Erp (TGM)

Department of Psychiatry and Human Behavior, University of California Irvine, Irvine, CA, USA.
Center for the Neurobiology of Learning and Memory, University of California Irvine, Irvine, CA, USA.

Jessica A Turner (JA)

Tri-Institutional Center for Translational Research in Neuroimaging and Data Science (TReNDS), Georgia State University, Georgia Institute of Technology, and Emory University, Atlanta, GA, USA.
Department of Psychology, Georgia State University, Atlanta, GA, USA.

Sergey Plis (S)

Tri-Institutional Center for Translational Research in Neuroimaging and Data Science (TReNDS), Georgia State University, Georgia Institute of Technology, and Emory University, Atlanta, GA, USA.
Department of Computer Science, Georgia State University, Atlanta, GA, USA.

Vince D Calhoun (VD)

Tri-Institutional Center for Translational Research in Neuroimaging and Data Science (TReNDS), Georgia State University, Georgia Institute of Technology, and Emory University, Atlanta, GA, USA.
School of Electrical and Computer Engineering, Georgia Institute of Technology, Atlanta, GA, USA.
Department of Computer Science, Georgia State University, Atlanta, GA, USA.

Classifications MeSH