Matere Bonds vs. Multivalent Halogen and Chalcogen Bonds: Three Case Studies.
DFT calculations
X-ray structures
chalcogen bond
halogen bond
matere bond
Journal
Molecules (Basel, Switzerland)
ISSN: 1420-3049
Titre abrégé: Molecules
Pays: Switzerland
ID NLM: 100964009
Informations de publication
Date de publication:
05 Oct 2022
05 Oct 2022
Historique:
received:
18
09
2022
revised:
29
09
2022
accepted:
03
10
2022
entrez:
14
10
2022
pubmed:
15
10
2022
medline:
18
10
2022
Statut:
epublish
Résumé
The term matere bond has been recently used to refer to an attractive noncovalent interaction between any element of group 7 acting as an electrophile and any atom (or group of atoms) acting as a nucleophile. The utilization of metals such as σ-hole donors is starting to attract the attention of the scientific community. In this manuscript, a comparison between matere bonds and well-known σ-hole interactions (halogen and chalcogen bonds) is carried out using three X-ray structures, retrieved from the Cambridge structural database (CSD), and density functional theory calculations (DFT). The novelty of this work resides in the utilization of a neutral Re(VII) system as the matere bond donor and multivalent chalcogen and halogen donors. In fact, as far as our knowledge extends, the description of σ-hole interactions in Se(VI) is unprecedented in the literature. The σ-hole interactions in Re(VII), Se(VI) and Cl(VII) electron acceptors are analyzed and compared using several computational tools.
Identifiants
pubmed: 36235133
pii: molecules27196597
doi: 10.3390/molecules27196597
pmc: PMC9571139
pii:
doi:
Substances chimiques
Chalcogens
0
Halogens
0
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Subventions
Organisme : Ministerio de ciencia e innovacion
ID : PID2020-115637GB-I00
Références
J Chem Inf Model. 2021 Aug 23;61(8):3945-3954
pubmed: 34375103
Phys Chem Chem Phys. 2017 Dec 13;19(48):32166-32178
pubmed: 29199313
J Mol Graph. 1996 Feb;14(1):33-8, 27-8
pubmed: 8744570
J Chem Theory Comput. 2011 Mar 8;7(3):625-632
pubmed: 21516178
Phys Chem Chem Phys. 2005 Sep 21;7(18):3297-305
pubmed: 16240044
Phys Chem Chem Phys. 2006 Mar 7;8(9):1057-65
pubmed: 16633586
Chemphyschem. 2021 Nov 18;22(22):2281-2285
pubmed: 34541753
Phys Chem Chem Phys. 2013 Jul 21;15(27):11178-89
pubmed: 23450152
Chemistry. 2022 Sep 6;28(50):e202201660
pubmed: 35670547
Angew Chem Int Ed Engl. 2021 Sep 13;60(38):20723-20727
pubmed: 34260810
Phys Chem Chem Phys. 2018 Jan 24;20(4):2676-2692
pubmed: 29319082
Chem Commun (Camb). 2022 Aug 16;58(66):9274-9277
pubmed: 35904031
J Chem Phys. 2010 Apr 21;132(15):154104
pubmed: 20423165
J Am Chem Soc. 2017 Aug 16;139(32):11012-11015
pubmed: 28770602
Chem Rev. 2016 Feb 24;116(4):2478-601
pubmed: 26812185
Acta Crystallogr B Struct Sci Cryst Eng Mater. 2016 Apr;72(Pt 2):171-9
pubmed: 27048719
Angew Chem Int Ed Engl. 2020 Sep 28;59(40):17482-17487
pubmed: 32542948