Single-cell analysis of skeletal muscle macrophages reveals age-associated functional subpopulations.


Journal

eLife
ISSN: 2050-084X
Titre abrégé: Elife
Pays: England
ID NLM: 101579614

Informations de publication

Date de publication:
19 10 2022
Historique:
received: 17 02 2022
accepted: 10 10 2022
pubmed: 20 10 2022
medline: 5 11 2022
entrez: 19 10 2022
Statut: epublish

Résumé

Tissue-resident macrophages represent a group of highly responsive innate immune cells that acquire diverse functions by polarizing toward distinct subpopulations. The subpopulations of macrophages that reside in skeletal muscle (SKM) and their changes during aging are poorly characterized. By single-cell transcriptomic analysis with unsupervised clustering, we found 11 distinct macrophage clusters in male mouse SKM with enriched gene expression programs linked to reparative, proinflammatory, phagocytic, proliferative, and senescence-associated functions. Using a complementary classification, membrane markers LYVE1 and MHCII identified four macrophage subgroups: LYVE1-/MHCII

Identifiants

pubmed: 36259488
doi: 10.7554/eLife.77974
pii: 77974
pmc: PMC9629833
doi:
pii:

Substances chimiques

Biomarkers 0

Banques de données

GEO
['GSE195507']

Types de publication

Journal Article Research Support, N.I.H., Intramural

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : Intramural NIH HHS
ID : Z01 AG000511
Pays : United States

Déclaration de conflit d'intérêts

LK, PC, CC, KM, CD, YP, JF, CS, TW, CN, IR, RM, DT, SD, PS, LF, MG No competing interests declared

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Auteurs

Linda K Krasniewski (LK)

Laboratory of Genetics and Genomics, National Institute on Aging Intramural Research Program, National Institutes of Health, Baltimore, United States.

Papiya Chakraborty (P)

Laboratory of Genetics and Genomics, National Institute on Aging Intramural Research Program, National Institutes of Health, Baltimore, United States.

Chang-Yi Cui (CY)

Laboratory of Genetics and Genomics, National Institute on Aging Intramural Research Program, National Institutes of Health, Baltimore, United States.

Krystyna Mazan-Mamczarz (K)

Laboratory of Genetics and Genomics, National Institute on Aging Intramural Research Program, National Institutes of Health, Baltimore, United States.

Christopher Dunn (C)

Flow Cytometry Core, National Institute on Aging Intramural Research Program, National Institutes of Health, Baltimore, United States.

Yulan Piao (Y)

Laboratory of Genetics and Genomics, National Institute on Aging Intramural Research Program, National Institutes of Health, Baltimore, United States.

Jinshui Fan (J)

Laboratory of Genetics and Genomics, National Institute on Aging Intramural Research Program, National Institutes of Health, Baltimore, United States.

Changyou Shi (C)

Laboratory of Genetics and Genomics, National Institute on Aging Intramural Research Program, National Institutes of Health, Baltimore, United States.

Tonya Wallace (T)

Flow Cytometry Core, National Institute on Aging Intramural Research Program, National Institutes of Health, Baltimore, United States.

Cuong Nguyen (C)

Flow Cytometry Core, National Institute on Aging Intramural Research Program, National Institutes of Health, Baltimore, United States.

Isabelle A Rathbun (IA)

Laboratory of Genetics and Genomics, National Institute on Aging Intramural Research Program, National Institutes of Health, Baltimore, United States.

Rachel Munk (R)

Laboratory of Genetics and Genomics, National Institute on Aging Intramural Research Program, National Institutes of Health, Baltimore, United States.

Dimitrios Tsitsipatis (D)

Laboratory of Genetics and Genomics, National Institute on Aging Intramural Research Program, National Institutes of Health, Baltimore, United States.

Supriyo De (S)

Laboratory of Genetics and Genomics, National Institute on Aging Intramural Research Program, National Institutes of Health, Baltimore, United States.

Payel Sen (P)

Laboratory of Genetics and Genomics, National Institute on Aging Intramural Research Program, National Institutes of Health, Baltimore, United States.

Luigi Ferrucci (L)

Translational Gerontology Branch, National Institute on Aging Intramural Research Program, National Institutes of Health, Baltimore, United States.

Myriam Gorospe (M)

Laboratory of Genetics and Genomics, National Institute on Aging Intramural Research Program, National Institutes of Health, Baltimore, United States.

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Classifications MeSH