Differential Interactome Based Drug Repositioning Unraveled Abacavir, Exemestane, Nortriptyline Hydrochloride, and Tolcapone as Potential Therapeutics for Colorectal Cancers.

colorectal cancer differential interactome drug repositioning prognostic markers systems biomarkers

Journal

Frontiers in bioinformatics
ISSN: 2673-7647
Titre abrégé: Front Bioinform
Pays: Switzerland
ID NLM: 9918227263306676

Informations de publication

Date de publication:
2021
Historique:
received: 16 05 2021
accepted: 01 09 2021
entrez: 28 10 2022
pubmed: 29 10 2022
medline: 29 10 2022
Statut: epublish

Résumé

There is a critical requirement for alternative strategies to provide the better treatment in colorectal cancer (CRC). Hence, our goal was to propose novel biomarkers as well as drug candidates for its treatment through differential interactome based drug repositioning. Differentially interacting proteins and their modules were identified, and their prognostic power were estimated through survival analyses. Drug repositioning was carried out for significant target proteins, and candidate drugs were analyzed via in silico molecular docking prior to

Identifiants

pubmed: 36303724
doi: 10.3389/fbinf.2021.710591
pii: 710591
pmc: PMC9581026
doi:

Types de publication

Journal Article

Langues

eng

Pagination

710591

Informations de copyright

Copyright © 2021 Beklen, Arslan, Gulfidan, Turanli, Ozbek, Karademir Yilmaz and Arga.

Déclaration de conflit d'intérêts

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

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Auteurs

Hande Beklen (H)

Department of Bioengineering, Faculty of Engineering, Marmara University, Istanbul, Turkey.

Sema Arslan (S)

Department of Biochemistry, School of Medicine, Marmara University, Istanbul, Turkey.

Gizem Gulfidan (G)

Department of Bioengineering, Faculty of Engineering, Marmara University, Istanbul, Turkey.

Beste Turanli (B)

Department of Bioengineering, Faculty of Engineering, Marmara University, Istanbul, Turkey.

Pemra Ozbek (P)

Department of Bioengineering, Faculty of Engineering, Marmara University, Istanbul, Turkey.

Betul Karademir Yilmaz (B)

Department of Biochemistry, School of Medicine, Marmara University, Istanbul, Turkey.
Genetic and Metabolic Diseases Research and Investigation Center (GEMHAM), Marmara University, Istanbul, Turkey.

Kazim Yalcin Arga (KY)

Department of Bioengineering, Faculty of Engineering, Marmara University, Istanbul, Turkey.

Classifications MeSH