A doxycycline- and light-inducible Cre recombinase mouse model for optogenetic genome editing.


Journal

Nature communications
ISSN: 2041-1723
Titre abrégé: Nat Commun
Pays: England
ID NLM: 101528555

Informations de publication

Date de publication:
28 10 2022
Historique:
received: 06 04 2022
accepted: 06 10 2022
entrez: 28 10 2022
pubmed: 29 10 2022
medline: 2 11 2022
Statut: epublish

Résumé

The experimental need to engineer the genome both in time and space, has led to the development of several photoactivatable Cre recombinase systems. However, the combination of inefficient and non-intentional background recombination has prevented thus far the wide application of these systems in biological and biomedical research. Here, we engineer an optimized photoactivatable Cre recombinase system that we refer to as doxycycline- and light-inducible Cre recombinase (DiLiCre). Following extensive characterization in cancer cell and organoid systems, we generate a DiLiCre mouse line, and illustrated the biological applicability of DiLiCre for light-induced mutagenesis in vivo and positional cell-tracing by intravital microscopy. These experiments illustrate how newly formed HrasV12 mutant cells follow an unnatural movement towards the interfollicular dermis. Together, we develop an efficient photoactivatable Cre recombinase mouse model and illustrate how this model is a powerful genome-editing tool for biological and biomedical research.

Identifiants

pubmed: 36307419
doi: 10.1038/s41467-022-33863-z
pii: 10.1038/s41467-022-33863-z
pmc: PMC9616875
doi:

Substances chimiques

Cre recombinase EC 2.7.7.-
Doxycycline N12000U13O
Integrases EC 2.7.7.-

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

6442

Informations de copyright

© 2022. The Author(s).

Références

EMBO J. 2020 Mar 2;39(5):e102169
pubmed: 31930530
Cell Rep. 2018 Oct 9;25(2):487-500.e6
pubmed: 30304687
Nat Commun. 2019 Jan 23;10(1):397
pubmed: 30674894
Nat Methods. 2019 Sep;16(9):870-874
pubmed: 31384047
Nat Cell Biol. 2017 May;19(5):530-541
pubmed: 28414314
Nat Methods. 2012 Jun 28;9(7):676-82
pubmed: 22743772
Nat Biotechnol. 2006 Apr;24(4):461-5
pubmed: 16550175
Lab Invest. 2021 Jan;101(1):125-135
pubmed: 32892213
Genes Immun. 2004 Mar;5(2):93-100
pubmed: 14668789
Nat Methods. 2015 Jul;12(7):645-8
pubmed: 25984699
Nat Chem Biol. 2016 Jun;12(6):425-30
pubmed: 27065233
Carcinogenesis. 2010 Dec;31(12):2127-35
pubmed: 20852150
Nat Commun. 2015 Feb 24;6:6256
pubmed: 25708714
Chem Sci. 2021 May 31;12(28):9658-9672
pubmed: 34349937
Cancer Cell. 2007 Oct;12(4):313-27
pubmed: 17936557
Proc Natl Acad Sci U S A. 2016 Oct 18;113(42):11859-11864
pubmed: 27708166
Nucleic Acids Res. 2007;35(12):e87
pubmed: 17576687
Cell. 2010 Oct 1;143(1):134-44
pubmed: 20887898
Sci Rep. 2017 May 8;7(1):1549
pubmed: 28484230
Nat Commun. 2020 May 1;11(1):2141
pubmed: 32358538
Elife. 2021 Feb 23;10:
pubmed: 33620312
J Cell Biol. 2019 Oct 7;218(10):3212-3222
pubmed: 31488583
Nature. 2016 Aug 18;536(7616):298-303
pubmed: 27459053
Nat Genet. 2017 Aug;49(8):1219-1230
pubmed: 28650484
Nat Methods. 2010 Dec;7(12):973-5
pubmed: 21037589
Nat Chem Biol. 2016 Dec;12(12):1059-1064
pubmed: 27723747
Proc Natl Acad Sci U S A. 2017 Mar 21;114(12):E2357-E2364
pubmed: 28270604
Nat Methods. 2017 Apr;14(4):391-394
pubmed: 28288123
Theranostics. 2021 Jan 1;11(2):614-648
pubmed: 33391496
Bioinformatics. 2017 Aug 01;33(15):2424-2426
pubmed: 28369169
Cell Stem Cell. 2015 Apr 2;16(4):400-12
pubmed: 25842978

Auteurs

Miguel Vizoso (M)

Department of Molecular Pathology, Oncode Institute, Netherlands Cancer Institute, Amsterdam, 1066 CX, The Netherlands. m.vizoso.patino@gmail.com.

Colin E J Pritchard (C)

Mouse Clinic for Cancer and Aging, The Netherlands Cancer Institute, Amsterdam, 1066 CX, The Netherlands.

Lorenzo Bombardelli (L)

Division of Molecular Carcinogenesis and Oncode Institute, Netherlands Cancer Institute, Amsterdam, 1066 CX, The Netherlands.

Bram van den Broek (B)

Cell Biophysics Group, Department of Cell Biology, The Netherlands Cancer Institute, Amsterdam, The Netherlands.
BioImaging Facility, The Netherlands Cancer Institute, Amsterdam, The Netherlands.

Paul Krimpenfort (P)

Mouse Clinic for Cancer and Aging, The Netherlands Cancer Institute, Amsterdam, 1066 CX, The Netherlands.

Roderick L Beijersbergen (RL)

Division of Molecular Carcinogenesis and Oncode Institute, Netherlands Cancer Institute, Amsterdam, 1066 CX, The Netherlands.
NKI Robotics and Screening Center and Genomics Core Facility, The Netherlands Cancer Institute, Amsterdam, The Netherlands.

Kees Jalink (K)

Cell Biophysics Group, Department of Cell Biology, The Netherlands Cancer Institute, Amsterdam, The Netherlands.
Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, The Netherlands.

Jacco van Rheenen (J)

Department of Molecular Pathology, Oncode Institute, Netherlands Cancer Institute, Amsterdam, 1066 CX, The Netherlands. j.v.rheenen@nki.nl.

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Classifications MeSH