Microbial Volatiles as Diagnostic Biomarkers of Bacterial Lung Infection in Mechanically Ventilated Patients.


Journal

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America
ISSN: 1537-6591
Titre abrégé: Clin Infect Dis
Pays: United States
ID NLM: 9203213

Informations de publication

Date de publication:
21 03 2023
Historique:
received: 23 06 2022
pubmed: 1 11 2022
medline: 24 3 2023
entrez: 31 10 2022
Statut: ppublish

Résumé

Early and accurate recognition of respiratory pathogens is crucial to prevent increased risk of mortality in critically ill patients. Microbial-derived volatile organic compounds (mVOCs) in exhaled breath could be used as noninvasive biomarkers of infection to support clinical diagnosis. In this study, we investigated the diagnostic potential of in vitro-confirmed mVOCs in the exhaled breath of patients under mechanical ventilation from the BreathDx study. Samples were analyzed by thermal desorption-gas chromatography-mass spectrometry. Pathogens from bronchoalveolar lavage (BAL) cultures were identified in 45 of 89 patients and Staphylococcus aureus was the most commonly identified pathogen (n = 15). Of 19 mVOCs detected in the in vitro culture headspace of 4 common respiratory pathogens (S. aureus, Pseudomonas aeruginosa, Klebsiella pneumoniae, and Escherichia coli), 14 were found in exhaled breath samples. Higher concentrations of 2 mVOCs were found in the exhaled breath of patients infected with S. aureus compared to those without (3-methylbutanal: P < .01, area under the receiver operating characteristic curve [AUROC] = 0.81-0.87; and 3-methylbutanoic acid: P = .01, AUROC = 0.79-0.80). In addition, bacteria identified from BAL cultures that are known to metabolize tryptophan (E. coli, Klebsiella oxytoca, and Haemophilus influenzae) were grouped and found to produce higher concentrations of indole compared to breath samples with culture-negative (P = .034) and other pathogen-positive (P = .049) samples. This study demonstrates the capability of using mVOCs to detect the presence of specific pathogen groups with potential to support clinical diagnosis. Although not all mVOCs were found in patient samples within this small pilot study, further targeted and qualitative investigation is warranted using multicenter clinical studies.

Sections du résumé

BACKGROUND
Early and accurate recognition of respiratory pathogens is crucial to prevent increased risk of mortality in critically ill patients. Microbial-derived volatile organic compounds (mVOCs) in exhaled breath could be used as noninvasive biomarkers of infection to support clinical diagnosis.
METHODS
In this study, we investigated the diagnostic potential of in vitro-confirmed mVOCs in the exhaled breath of patients under mechanical ventilation from the BreathDx study. Samples were analyzed by thermal desorption-gas chromatography-mass spectrometry.
RESULTS
Pathogens from bronchoalveolar lavage (BAL) cultures were identified in 45 of 89 patients and Staphylococcus aureus was the most commonly identified pathogen (n = 15). Of 19 mVOCs detected in the in vitro culture headspace of 4 common respiratory pathogens (S. aureus, Pseudomonas aeruginosa, Klebsiella pneumoniae, and Escherichia coli), 14 were found in exhaled breath samples. Higher concentrations of 2 mVOCs were found in the exhaled breath of patients infected with S. aureus compared to those without (3-methylbutanal: P < .01, area under the receiver operating characteristic curve [AUROC] = 0.81-0.87; and 3-methylbutanoic acid: P = .01, AUROC = 0.79-0.80). In addition, bacteria identified from BAL cultures that are known to metabolize tryptophan (E. coli, Klebsiella oxytoca, and Haemophilus influenzae) were grouped and found to produce higher concentrations of indole compared to breath samples with culture-negative (P = .034) and other pathogen-positive (P = .049) samples.
CONCLUSIONS
This study demonstrates the capability of using mVOCs to detect the presence of specific pathogen groups with potential to support clinical diagnosis. Although not all mVOCs were found in patient samples within this small pilot study, further targeted and qualitative investigation is warranted using multicenter clinical studies.

Identifiants

pubmed: 36310531
pii: 6781005
doi: 10.1093/cid/ciac859
pmc: PMC10029988
doi:

Substances chimiques

Volatile Organic Compounds 0
Biomarkers 0

Types de publication

Multicenter Study Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

1059-1066

Subventions

Organisme : Department of Health
Pays : United Kingdom

Investigateurs

Waqar M Ahmed (WM)
Antonio Artigas Raventos (AA)
Jonathan Bannard-Smith (J)
Lieuwe D J Bos (LDJ)
Marta Camprubi (M)
Luis Coelho (L)
Paul Dark (P)
Alan Davie (A)
Emili Diaz (E)
Gemma Goma (G)
Timothy Felton (T)
Stephen J Fowler (SJ)
Royston Goodacre (R)
Craig Johnson (C)
Hugo Knobel (H)
Oluwasola Lawal (O)
Jan-Hendrik Leopold (JH)
Ignacio Martin-Loeches (I)
Tamara M E Nijsen (TME)
Pouline M P van Oort (PMP)
Pedro Povoa (P)
Nicholas J W Rattray (NJW)
Guus Rijnders (G)
Marcus J Schultz (MJ)
Ruud Steenwelle (R)
Peter J Sterk (PJ)
Jordi Valles (J)
Fred Verhoeckx (F)
Anton Vink (A)
Hans Weda (H)
Iain R White (IR)
Tineke Winters (T)
Tetyana Zakharkina (T)

Informations de copyright

© The Author(s) 2022. Published by Oxford University Press on behalf of Infectious Diseases Society of America.

Déclaration de conflit d'intérêts

Potential conflicts of interest. P. D. is Deputy Medical Director, NIHR National Research Network (payment to institution), and NIHR Senior Investigator (payment to employing institution). B. D. reports travel accommodation from Markes International for the Breath Summit conference 2022. L. D. J. B. reports consulting fees from Scailyte and Santhera (paid to institution) and participation on advisory board for Sobi, Excastat, Pfizer, and AstraZeneca. P. B. reports grants for development of chemical sensor–driven technology from Amsterdam University Medical Center (Innovatie Impuls 2020), Vertex (Vertex Innovation Award 2022), Stichting Astma Bestrijding, and Boehringer Ingelheim; a public-private partnership grant from Eurostars; and a grant for Disaster-Resilient Society 2021 (HORIZON-CL3-2021-DRS-01) from the Horizon Europe Framework Programme. All other authors report no potential conflicts. All authors have submitted the ICMJE Form for Disclosure of Potential Conflicts of Interest. Conflicts that the editors consider relevant to the content of the manuscript have been disclosed.

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Auteurs

Waqar M Ahmed (WM)

Division of Infection, Immunity and Respiratory Medicine, School of Biological Sciences, Faculty of Biology, Medicine and Health, University of Manchester, and Manchester Academic Health Science Centre and National Institute for Health Research Biomedical Research Centre, Manchester University Hospitals NHS Foundation Trust, Manchester, United Kingdom.

Dominic Fenn (D)

Department of Respiratory Medicine, Amsterdam UMC-location AMC, University of Amsterdam, Amsterdam, The Netherlands.
Laboratory of Experimental Intensive Care and Anaesthesiology, Amsterdam University Medical Center (UMC), Academic Medical Center (AMC), Amsterdam, The Netherlands.

Iain R White (IR)

Division of Infection, Immunity and Respiratory Medicine, School of Biological Sciences, Faculty of Biology, Medicine and Health, University of Manchester, and Manchester Academic Health Science Centre and National Institute for Health Research Biomedical Research Centre, Manchester University Hospitals NHS Foundation Trust, Manchester, United Kingdom.
Laboratory for Environmental and Life Science, University of Nova Gorica, Nova Gorica, Slovenia.

Breanna Dixon (B)

Division of Infection, Immunity and Respiratory Medicine, School of Biological Sciences, Faculty of Biology, Medicine and Health, University of Manchester, and Manchester Academic Health Science Centre and National Institute for Health Research Biomedical Research Centre, Manchester University Hospitals NHS Foundation Trust, Manchester, United Kingdom.

Tamara M E Nijsen (TME)

Philips Research, Philips BV, Eindhoven, The Netherlands.

Hugo H Knobel (HH)

Eurofins Materials Science Netherlands BV, High Tech Campus, Eindhoven, The Netherlands.

Paul Brinkman (P)

Department of Respiratory Medicine, Amsterdam UMC-location AMC, University of Amsterdam, Amsterdam, The Netherlands.

Pouline M P Van Oort (PMP)

Department of Anaesthesiology, Amsterdam UMC Location VU Medical Center, Amsterdam, The Netherlands.

Marcus J Schultz (MJ)

Intensive Care, Amsterdam UMC Location AMC, Amsterdam, The Netherlands.
Mahidol-Oxford Tropical Medicine Research Unit, Mahidol University, Bangkok, Thailand.
Department of Clinical Affairs, Hamilton Medical AG, Chur, Switzerland.

Paul Dark (P)

Division of Infection, Immunity and Respiratory Medicine, School of Biological Sciences, Faculty of Biology, Medicine and Health, University of Manchester, and Manchester Academic Health Science Centre and National Institute for Health Research Biomedical Research Centre, Manchester University Hospitals NHS Foundation Trust, Manchester, United Kingdom.
Critical Care Unit, Salford Royal NHS Foundation Trust, Northern Care Alliance NHS Group, Manchester, United Kingdom.

Royston Goodacre (R)

Centre for Metabolomics Research, Department of Biochemistry and Systems Biology, Institute of Systems, Molecular and Integrative Biology, University of Liverpool, Liverpool, United Kingdom.

Timothy Felton (T)

Division of Infection, Immunity and Respiratory Medicine, School of Biological Sciences, Faculty of Biology, Medicine and Health, University of Manchester, and Manchester Academic Health Science Centre and National Institute for Health Research Biomedical Research Centre, Manchester University Hospitals NHS Foundation Trust, Manchester, United Kingdom.

Lieuwe D J Bos (LDJ)

Department of Respiratory Medicine, Amsterdam UMC-location AMC, University of Amsterdam, Amsterdam, The Netherlands.
Laboratory of Experimental Intensive Care and Anaesthesiology, Amsterdam University Medical Center (UMC), Academic Medical Center (AMC), Amsterdam, The Netherlands.
Mahidol-Oxford Tropical Medicine Research Unit, Mahidol University, Bangkok, Thailand.

Stephen J Fowler (SJ)

Division of Infection, Immunity and Respiratory Medicine, School of Biological Sciences, Faculty of Biology, Medicine and Health, University of Manchester, and Manchester Academic Health Science Centre and National Institute for Health Research Biomedical Research Centre, Manchester University Hospitals NHS Foundation Trust, Manchester, United Kingdom.

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