Representing Polymers as Periodic Graphs with Learned Descriptors for Accurate Polymer Property Predictions.


Journal

Journal of chemical information and modeling
ISSN: 1549-960X
Titre abrégé: J Chem Inf Model
Pays: United States
ID NLM: 101230060

Informations de publication

Date de publication:
28 11 2022
Historique:
pubmed: 1 11 2022
medline: 30 11 2022
entrez: 31 10 2022
Statut: ppublish

Résumé

Accurately predicting new polymers' properties with machine learning models apriori to synthesis has potential to significantly accelerate new polymers' discovery and development. However, accurately and efficiently capturing polymers' complex, periodic structures in machine learning models remains a grand challenge for the polymer cheminformatics community. Specifically, there has yet to be an ideal solution for the problems of how to capture the periodicity of polymers, as well as how to optimally develop polymer descriptors without requiring human-based feature design. In this work, we tackle these problems by utilizing a periodic polymer graph representation that accounts for polymers' periodicity and coupling it with a message-passing neural network that leverages the power of graph deep learning to automatically learn chemically relevant polymer descriptors. Remarkably, this approach achieves state-of-the-art performance on 8 out of 10 distinct polymer property prediction tasks. These results highlight the advancement in predictive capability that is possible through learning descriptors that are specifically optimized for capturing the unique chemical structure of polymers.

Identifiants

pubmed: 36315033
doi: 10.1021/acs.jcim.2c00875
doi:

Substances chimiques

Polymers 0

Types de publication

Journal Article Research Support, U.S. Gov't, Non-P.H.S.

Langues

eng

Sous-ensembles de citation

IM

Pagination

5435-5445

Auteurs

Evan R Antoniuk (ER)

Materials Science Division, Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, California94550-5507, United States.

Peggy Li (P)

Global Security Computing Applications Division, Computing Directorate, Lawrence Livermore National Laboratory, Livermore, California94550-5507, United States.

Bhavya Kailkhura (B)

Machine Intelligence Group/Center for Applied Scientific Computing, Computing Directorate, Lawrence Livermore National Laboratory, Livermore, California94550-5507, United States.

Anna M Hiszpanski (AM)

Materials Science Division, Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, California94550-5507, United States.

Articles similaires

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male

Classifications MeSH