Population genetic structure of

Wikstroemia monnula delta K hierarchical STRUCTURE analysis optimal K population structure

Journal

Frontiers in plant science
ISSN: 1664-462X
Titre abrégé: Front Plant Sci
Pays: Switzerland
ID NLM: 101568200

Informations de publication

Date de publication:
2022
Historique:
received: 06 06 2022
accepted: 08 09 2022
entrez: 4 11 2022
pubmed: 5 11 2022
medline: 5 11 2022
Statut: epublish

Résumé

Population genetic structure can provide valuable insights for conserving genetic resources and understanding population evolution, but it is often underestimated when using the most popular method and software, STRUCTURE and delta K, to assess. Although the hierarchical STRUCTURE analysis has been proposed early to overcome the above potential problems, this method was just utilized in a few studies and its reliability needs to be further tested. In this study, the genetic structure of populations of

Identifiants

pubmed: 36330273
doi: 10.3389/fpls.2022.962364
pmc: PMC9624186
doi:

Types de publication

Journal Article

Langues

eng

Pagination

962364

Informations de copyright

Copyright © 2022 Zhang, Tang, Tian, Huang, Yang, Nan, Wang, Li, Song, Yang, Zhong and Zhang.

Déclaration de conflit d'intérêts

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Références

Genetics. 2016 Aug;203(4):1827-39
pubmed: 27317680
Bioinformatics. 2012 Oct 1;28(19):2537-9
pubmed: 22820204
Bioinformatics. 2003 Mar 22;19(5):651-2
pubmed: 12651724
Nucleic Acids Res. 2012 Aug;40(15):e115
pubmed: 22730293
Evol Bioinform Online. 2007 Feb 23;1:47-50
pubmed: 19325852
Mol Ecol. 2014 Mar;23(5):1000-13
pubmed: 24410817
J Mol Evol. 1983;19(2):153-70
pubmed: 6571220
Science. 2002 Dec 20;298(5602):2381-5
pubmed: 12493913
Genetics. 2000 Jun;155(2):945-59
pubmed: 10835412
Nat Protoc. 2013 Aug;8(8):1494-512
pubmed: 23845962
Mol Ecol. 2005 Jul;14(8):2611-20
pubmed: 15969739
Nat Biotechnol. 2011 May 15;29(7):644-52
pubmed: 21572440
Mol Ecol. 2017 Jul;26(14):3594-3602
pubmed: 28544181
Mol Ecol. 2002 Feb;11(2):155-65
pubmed: 11856418

Auteurs

Chaoqiang Zhang (C)

College of Life Sciences and Engineering, Hexi University, Zhangye, China.
Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, Institute of Biodiversity Science, Fudan University, Shanghai, China.
Institute for Preservation and Conservation of Chinese Ancient Books, Fudan University, Shanghai, China.

Yiwei Tang (Y)

Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, Institute of Biodiversity Science, Fudan University, Shanghai, China.

Defeng Tian (D)

Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, Institute of Biodiversity Science, Fudan University, Shanghai, China.

Yanyan Huang (Y)

Institute for Preservation and Conservation of Chinese Ancient Books, Fudan University, Shanghai, China.

Guanghui Yang (G)

Institute for Preservation and Conservation of Chinese Ancient Books, Fudan University, Shanghai, China.

Peng Nan (P)

Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, Institute of Biodiversity Science, Fudan University, Shanghai, China.

Yuguo Wang (Y)

Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, Institute of Biodiversity Science, Fudan University, Shanghai, China.

Lingfeng Li (L)

Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, Institute of Biodiversity Science, Fudan University, Shanghai, China.

Zhiping Song (Z)

Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, Institute of Biodiversity Science, Fudan University, Shanghai, China.

Ji Yang (J)

Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, Institute of Biodiversity Science, Fudan University, Shanghai, China.

Yang Zhong (Y)

Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, Institute of Biodiversity Science, Fudan University, Shanghai, China.

Wenju Zhang (W)

Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, Institute of Biodiversity Science, Fudan University, Shanghai, China.

Classifications MeSH