Comprehensive clinicopathological and genomic profiling of gallbladder cancer reveals actionable targets in half of patients.


Journal

NPJ precision oncology
ISSN: 2397-768X
Titre abrégé: NPJ Precis Oncol
Pays: England
ID NLM: 101708166

Informations de publication

Date de publication:
05 Nov 2022
Historique:
received: 17 05 2022
accepted: 17 10 2022
entrez: 6 11 2022
pubmed: 6 11 2022
medline: 6 11 2022
Statut: epublish

Résumé

Gallbladder cancer (GBC) is a rare, highly aggressive malignancy with a 5-year survival rate of 5-10% in advanced cases, highlighting the need for more effective therapies. The aim of this study was to identify potentially actionable therapeutic targets for GBC. Specimens and clinicopathological data of 642 GBC patients, diagnosed between 2000 and 2019 were collected using the Dutch Pathology Registry (PALGA) and the Netherlands Cancer Registry. All cases were histologically reviewed and a subset was subjected to a comprehensive next generation sequencing panel. We assessed mutations and gene amplifications in a panel of 54 actionable genes, tumor-mutational burden (TMB), and microsatellite instability (MSI). Additionally, the entire cohort was screened for HER2, PD-L1, pan-TRK, and p53 expression with immunohistochemistry. Histopathological subtypes comprised biliary-type adenocarcinoma (AC, 69.6%), intestinal-type AC (20.1%) and other subtypes (10.3%). The median total TMB was 5.5 mutations/Mb (range: 0-161.1) and 17.7% of evaluable cases had a TMB of >10 mutations/Mb. MSI was observed in two cases. Apart from mutations in TP53 (64%), tumors were molecularly highly heterogeneous. Half of the tumors (50%) carried at least one molecular alteration that is targetable in other tumor types, including alterations in CDKN2A (6.0% biallelically inactivated), ERBB2 (9.3%) and PIK3CA (10%). Immunohistochemistry results correlated well with NGS results for HER2 and p53: Pearson r = 0.82 and 0.83, respectively. As half of GBC patients carry at least one potentially actionable molecular alteration, molecular testing may open the way to explore targeted therapy options for GBC patients.

Identifiants

pubmed: 36335173
doi: 10.1038/s41698-022-00327-y
pii: 10.1038/s41698-022-00327-y
pmc: PMC9637208
doi:

Types de publication

Journal Article

Langues

eng

Pagination

83

Informations de copyright

© 2022. The Author(s).

Références

Nat Genet. 2015 Sep;47(9):1003-10
pubmed: 26258846
J Surg Oncol. 2017 Apr;115(5):580-590
pubmed: 28138977
J Clin Oncol. 2019 Apr 20;37(12):992-1000
pubmed: 30785829
Cell Oncol. 2007;29(1):19-24
pubmed: 17429138
Clin Epidemiol. 2014 Mar 07;6:99-109
pubmed: 24634588
Cancer Med. 2018 Mar;7(3):746-756
pubmed: 29436178
Sci Rep. 2020 Dec 16;10(1):22087
pubmed: 33328484
JCO Precis Oncol. 2019 Oct 17;3:
pubmed: 32923849
Front Oncol. 2021 Jun 07;11:683419
pubmed: 34164344
ESMO Open. 2020 Jun;5(3):e000682
pubmed: 32576609
Hum Pathol. 2014 Aug;45(8):1630-8
pubmed: 24837095
Gut. 2019 Jun;68(6):1024-1033
pubmed: 29954840
Lung Cancer (Auckl). 2021 May 20;12:35-50
pubmed: 34295201
Cancers (Basel). 2021 Oct 20;13(21):
pubmed: 34771420
J Mol Diagn. 2020 Jun;22(6):757-769
pubmed: 32205293
JCO Precis Oncol. 2017 Jul;2017:
pubmed: 28890946
Ann Surg Oncol. 2007 Feb;14(2):833-40
pubmed: 17103074
J Thorac Oncol. 2016 Jul;11(7):964-75
pubmed: 27117833
Cancers (Basel). 2021 Jun 14;13(12):
pubmed: 34198644
Histopathology. 2019 Sep;75(3):394-404
pubmed: 31044440
Oncologist. 2014 Mar;19(3):235-42
pubmed: 24563076
Nat Commun. 2020 Aug 24;11(1):4225
pubmed: 32839463
J Gastrointest Oncol. 2019 Aug;10(4):652-662
pubmed: 31392046
Crit Rev Oncol Hematol. 2021 Jul;163:103328
pubmed: 33862244
Cancer Genet. 2015 Dec;208(12):587-94
pubmed: 26586294
Cancers (Basel). 2020 Apr 09;12(4):
pubmed: 32283627
J Hepatol. 2018 May;68(5):959-969
pubmed: 29360550
Clin Cancer Res. 2016 Jun 15;22(12):2832-4
pubmed: 27009743
J Mol Diagn. 2016 May;18(3):388-394
pubmed: 26947513
N Engl J Med. 2017 Dec 21;377(25):2500-2501
pubmed: 29262275
Nat Genet. 2014 Aug;46(8):872-6
pubmed: 24997986
JCO Precis Oncol. 2021 Mar 08;5:
pubmed: 34036234
Cell Rep. 2017 Mar 14;18(11):2780-2794
pubmed: 28297679
J Exp Clin Cancer Res. 2016 Jun 18;35(1):97
pubmed: 27317099
Nat Genet. 2019 Feb;51(2):202-206
pubmed: 30643254

Auteurs

Tessa J J de Bitter (TJJ)

Radboud University Medical Center, Radboud Institute for Molecular Life Sciences, Department of Pathology, Nijmegen, The Netherlands. Tessa.JJ.deBitter@radboudumc.nl.

Philip R de Reuver (PR)

Radboud University Medical Center, Radboud Institute for Health Sciences, Department of Surgery, Nijmegen, The Netherlands.

Elise A J de Savornin Lohman (EAJ)

Radboud University Medical Center, Radboud Institute for Health Sciences, Department of Surgery, Nijmegen, The Netherlands.

Leonie I Kroeze (LI)

Radboud University Medical Center, Radboud Institute for Molecular Life Sciences, Department of Pathology, Nijmegen, The Netherlands.

Marianne E Vink-Börger (ME)

Radboud University Medical Center, Radboud Institute for Molecular Life Sciences, Department of Pathology, Nijmegen, The Netherlands.

Shannon van Vliet (S)

Radboud University Medical Center, Radboud Institute for Molecular Life Sciences, Department of Pathology, Nijmegen, The Netherlands.

Femke Simmer (F)

Radboud University Medical Center, Radboud Institute for Molecular Life Sciences, Department of Pathology, Nijmegen, The Netherlands.

Daniel von Rhein (D)

Radboud University Medical Center, Radboud Institute for Molecular Life Sciences, Department of Human Genetics, Nijmegen, The Netherlands.

Erik A M Jansen (EAM)

Radboud University Medical Center, Radboud Institute for Molecular Life Sciences, Department of Human Genetics, Nijmegen, The Netherlands.

Joanne Verheij (J)

Cancer Center Amsterdam, Amsterdam UMC, University of Amsterdam, Department of Pathology, Amsterdam, The Netherlands.

Carla M L van Herpen (CML)

Radboud University Medical Center, Radboud Institute for Health Sciences, Department of Medical Oncology, Nijmegen, The Netherlands.

Iris D Nagtegaal (ID)

Radboud University Medical Center, Radboud Institute for Molecular Life Sciences, Department of Pathology, Nijmegen, The Netherlands.

Marjolijn J L Ligtenberg (MJL)

Radboud University Medical Center, Radboud Institute for Molecular Life Sciences, Department of Pathology, Nijmegen, The Netherlands.
Radboud University Medical Center, Radboud Institute for Molecular Life Sciences, Department of Human Genetics, Nijmegen, The Netherlands.

Rachel S van der Post (RS)

Radboud University Medical Center, Radboud Institute for Molecular Life Sciences, Department of Pathology, Nijmegen, The Netherlands.

Classifications MeSH