Genomic and Environmental Factors Shape the Active Gill Bacterial Community of an Amazonian Teleost Holobiont.
16S RNA
bacterioplankton
environmental microbiology
fish
genotype
gill
metagenomics
microbial ecology
population genetics
transcription
Journal
Microbiology spectrum
ISSN: 2165-0497
Titre abrégé: Microbiol Spectr
Pays: United States
ID NLM: 101634614
Informations de publication
Date de publication:
21 12 2022
21 12 2022
Historique:
pubmed:
30
11
2022
medline:
28
12
2022
entrez:
29
11
2022
Statut:
ppublish
Résumé
Fish bacterial communities provide functions critical for their host's survival in contrasting environments. These communities are sensitive to environmental-specific factors (i.e., physicochemical parameters, bacterioplankton), and host-specific factors (i.e., host genetic background). The relative contribution of these factors shaping Amazonian fish bacterial communities is largely unknown. Here, we investigated this topic by analyzing the gill bacterial communities of 240 wild flag cichlids (
Identifiants
pubmed: 36445161
doi: 10.1128/spectrum.02064-22
pmc: PMC9769777
doi:
Substances chimiques
RNA, Ribosomal, 16S
0
Water
059QF0KO0R
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
e0206422Références
Nat Commun. 2021 Aug 26;12(1):5141
pubmed: 34446709
Front Microbiol. 2017 Jan 31;8:102
pubmed: 28197142
J Evol Biol. 2018 Jun;31(6):882-892
pubmed: 29577482
PLoS One. 2019 Sep 26;14(9):e0222501
pubmed: 31557179
Sci Rep. 2016 Aug 18;6:32032
pubmed: 27535789
PLoS One. 2014 Jul 28;9(7):e102649
pubmed: 25068850
Exp Parasitol. 2020 Feb 19;211:107862
pubmed: 32087220
Microbiome. 2020 Jun 13;8(1):93
pubmed: 32534596
Front Microbiol. 2017 May 23;8:882
pubmed: 28588561
World J Gastroenterol. 2010 Sep 7;16(33):4135-44
pubmed: 20806429
ISME J. 2015 Nov;9(11):2515-26
pubmed: 25909977
Appl Environ Microbiol. 2018 Aug 1;84(16):
pubmed: 29915104
Mol Ecol. 2022 Sep;31(18):4656-4671
pubmed: 35729748
J Nutr. 2011 May;141(5):769-76
pubmed: 21430248
Cell Mol Gastroenterol Hepatol. 2021;11(5):1463-1482
pubmed: 33610769
Bull Environ Contam Toxicol. 2017 Jan;98(1):27-32
pubmed: 27888328
Microbiome. 2021 May 17;9(1):109
pubmed: 34001275
Microorganisms. 2021 Sep 11;9(9):
pubmed: 34576827
J Exp Zool A Ecol Integr Physiol. 2021 Nov;335(9-10):843-863
pubmed: 33970558
Sci Rep. 2016 Feb 08;6:20377
pubmed: 26853589
Front Genet. 2017 Aug 31;8:114
pubmed: 28912799
Microbiome. 2015 Sep 10;3:39
pubmed: 26353777
Appl Environ Microbiol. 2020 Mar 2;86(6):
pubmed: 31953333
PLoS Comput Biol. 2016 Jun 21;12(6):e1004957
pubmed: 27327495
Nat Methods. 2016 Jul;13(7):581-3
pubmed: 27214047
Mol Ecol Resour. 2013 Jul;13(4):663-73
pubmed: 23617785
PLoS One. 2013 Apr 22;8(4):e61217
pubmed: 23630581
Front Microbiol. 2014 Jun 02;5:207
pubmed: 24917852
Can J Microbiol. 2014 Oct;60(10):669-80
pubmed: 25302531
Fish Shellfish Immunol Rep. 2021 Sep 06;2:100026
pubmed: 36420507
Genome Announc. 2017 Jan 12;5(2):
pubmed: 28082494
R Soc Open Sci. 2016 Jun 08;3(6):160206
pubmed: 27429777
Front Microbiol. 2018 May 23;9:1073
pubmed: 29875764
Symbiosis. 1991;11:93-101
pubmed: 11538111
Sci Rep. 2020 Sep 18;10(1):15349
pubmed: 32948815
Microbiome. 2018 Mar 14;6(1):47
pubmed: 29540239
Fish Shellfish Immunol. 2019 Mar;86:497-506
pubmed: 30513381
Compr Physiol. 2014 Apr;4(2):405-573
pubmed: 24715560
Proc Natl Acad Sci U S A. 2014 Jul 29;111(30):11085-90
pubmed: 25024226
Ecology. 2008 Sep;89(9):2623-32
pubmed: 18831183
Microbiome. 2023 May 16;11(1):108
pubmed: 37194081
BMC Microbiol. 2021 Nov 10;21(1):313
pubmed: 34758745
Front Microbiol. 2018 Jan 15;8:2664
pubmed: 29379473
Evolution. 2014 Jul;68(7):1947-60
pubmed: 24641091
Microbiome. 2014 May 15;2:17
pubmed: 24883185
Sci Rep. 2017 Jul 12;7(1):5263
pubmed: 28701764
Genome Announc. 2016 Dec 22;4(6):
pubmed: 28007865
FEMS Microbiol Rev. 2014 Nov;38(6):1235-49
pubmed: 25211180
Proc Biol Sci. 2021 Aug 25;288(1957):20211044
pubmed: 34403628
Appl Environ Microbiol. 2020 Aug 3;86(16):
pubmed: 32503908
Mol Ecol. 2019 Aug;28(15):3612-3626
pubmed: 31325401
Microbiome. 2020 Jan 31;8(1):9
pubmed: 32005134
Appl Environ Microbiol. 2018 Apr 16;84(9):
pubmed: 29453266
Ecology. 2009 Dec;90(12):3566-74
pubmed: 20120823
mSphere. 2020 May 20;5(3):
pubmed: 32434844
ISME J. 2016 May;10(5):1280-4
pubmed: 26517698
PLoS Pathog. 2021 May 13;17(5):e1009514
pubmed: 33984069
Dis Aquat Organ. 2013 Mar 13;103(1):35-43
pubmed: 23482383