Whole-exome sequencing of selected bread wheat recombinant inbred lines as a useful resource for allele mining and bulked segregant analysis.
bulked segregant analysis (BSA)
exome capture
recombinant inbred lines
single nucleotide polymorphisms (SNPs)
target-enrichment
wheat
Journal
Frontiers in genetics
ISSN: 1664-8021
Titre abrégé: Front Genet
Pays: Switzerland
ID NLM: 101560621
Informations de publication
Date de publication:
2022
2022
Historique:
received:
04
10
2022
accepted:
07
11
2022
entrez:
9
12
2022
pubmed:
10
12
2022
medline:
10
12
2022
Statut:
epublish
Résumé
Although wheat (
Identifiants
pubmed: 36482886
doi: 10.3389/fgene.2022.1058471
pii: 1058471
pmc: PMC9723387
doi:
Banques de données
figshare
['10.6084/m9.figshare.19485569.v1']
Types de publication
Journal Article
Langues
eng
Pagination
1058471Informations de copyright
Copyright © 2022 Esposito, D’Agostino, Taranto, Sonnante, Sestili, Lafiandra and De Vita.
Déclaration de conflit d'intérêts
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
Références
Bioinformatics. 2009 Jul 15;25(14):1754-60
pubmed: 19451168
Theor Appl Genet. 2021 Nov;134(11):3699-3719
pubmed: 34333664
Plants (Basel). 2021 Feb 06;10(2):
pubmed: 33562160
Theor Appl Genet. 2020 Jul;133(7):2063-2073
pubmed: 32172298
Nature. 2017 Mar 15;543(7645):346-354
pubmed: 28300107
Bioinformatics. 2011 Aug 1;27(15):2156-8
pubmed: 21653522
Science. 2018 Aug 17;361(6403):
pubmed: 30115783
Nat Plants. 2021 Sep;7(9):1207-1212
pubmed: 34462575
Genes (Basel). 2021 Apr 20;12(4):
pubmed: 33923933
Nat Commun. 2017 May 12;8:15407
pubmed: 28497807
J Exp Bot. 2019 Apr 29;70(9):2549-2560
pubmed: 29901813
Annu Rev Genet. 2017 Nov 27;51:435-454
pubmed: 28934591
Front Plant Sci. 2022 Sep 06;13:984269
pubmed: 36147234
Theor Appl Genet. 2020 Mar;133(3):719-736
pubmed: 31993676
PLoS One. 2012;7(3):e33234
pubmed: 22457747
J Plant Res. 2018 May;131(3):487-496
pubmed: 29260339
Bioinformatics. 2014 Aug 1;30(15):2114-20
pubmed: 24695404
Nat Commun. 2017 Apr 28;8:15121
pubmed: 28452349
Front Plant Sci. 2019 Nov 05;10:1428
pubmed: 31749826
Nat Genet. 2019 May;51(5):896-904
pubmed: 31043759
PLoS One. 2011 May 04;6(5):e19379
pubmed: 21573248
Bioinformatics. 2012 Oct 15;28(20):2678-9
pubmed: 22914218
Front Plant Sci. 2020 Aug 13;11:1249
pubmed: 32903549
New Phytol. 2020 Nov;228(3):1011-1026
pubmed: 32569398
Front Plant Sci. 2017 Dec 19;8:2164
pubmed: 29312405
PLoS One. 2012;7(2):e32253
pubmed: 22389690
Mol Ecol Resour. 2016 Sep;16(5):1136-46
pubmed: 27428061
Proc Natl Acad Sci U S A. 2020 Nov 17;117(46):28708-28718
pubmed: 33127757
Science. 2006 Nov 24;314(5803):1298-301
pubmed: 17124321
Biotechnol Adv. 2010 Jul-Aug;28(4):451-61
pubmed: 20188810
Proc Natl Acad Sci U S A. 2003 May 13;100(10):6263-8
pubmed: 12730378
Front Plant Sci. 2018 May 31;9:717
pubmed: 29904390
PLoS One. 2015 Sep 03;10(9):e0137549
pubmed: 26335335
Proc Natl Acad Sci U S A. 2017 Feb 7;114(6):E913-E921
pubmed: 28096351
Fly (Austin). 2012 Apr-Jun;6(2):80-92
pubmed: 22728672
Science. 2004 Mar 12;303(5664):1640-4
pubmed: 15016992
Nat Genet. 2019 Oct;51(10):1530-1539
pubmed: 31548720
Nat Genet. 2019 May;51(5):905-911
pubmed: 31043760
PLoS One. 2015 Dec 01;10(12):e0143890
pubmed: 26625271
Science. 2009 Mar 6;323(5919):1357-60
pubmed: 19228999
Mol Genet Genomics. 2018 Apr;293(2):463-477
pubmed: 29188438
Science. 2007 Jun 29;316(5833):1862-6
pubmed: 17600208
Curr Protoc Bioinformatics. 2013;43:11.10.1-11.10.33
pubmed: 25431634
Plant Cell. 2014 Apr 11;26(4):1382-1397
pubmed: 24728647
Sci Rep. 2021 Jun 4;11(1):11877
pubmed: 34088972
Bioinformatics. 2009 Aug 15;25(16):2078-9
pubmed: 19505943
Plant J. 2016 Aug;87(4):403-19
pubmed: 27144898
Theor Appl Genet. 2020 Aug;133(8):2413-2430
pubmed: 32500260
PLoS One. 2019 Mar 6;14(3):e0200669
pubmed: 30840619
Plant J. 2021 Jul;107(1):303-314
pubmed: 33893684