Optimal transport features for morphometric population analysis.


Journal

Medical image analysis
ISSN: 1361-8423
Titre abrégé: Med Image Anal
Pays: Netherlands
ID NLM: 9713490

Informations de publication

Date de publication:
02 2023
Historique:
received: 29 12 2021
revised: 28 07 2022
accepted: 17 11 2022
pmc-release: 01 02 2024
pubmed: 11 12 2022
medline: 5 1 2023
entrez: 10 12 2022
Statut: ppublish

Résumé

Brain pathologies often manifest as partial or complete loss of tissue. The goal of many neuroimaging studies is to capture the location and amount of tissue changes with respect to a clinical variable of interest, such as disease progression. Morphometric analysis approaches capture local differences in the distribution of tissue or other quantities of interest in relation to a clinical variable. We propose to augment morphometric analysis with an additional feature extraction step based on unbalanced optimal transport. The optimal transport feature extraction step increases statistical power for pathologies that cause spatially dispersed tissue loss, minimizes sensitivity to shifts due to spatial misalignment or differences in brain topology, and separates changes due to volume differences from changes due to tissue location. We demonstrate the proposed optimal transport feature extraction step in the context of a volumetric morphometric analysis of the OASIS-1 study for Alzheimer's disease. The results demonstrate that the proposed approach can identify tissue changes and differences that are not otherwise measurable.

Identifiants

pubmed: 36495600
pii: S1361-8415(22)00324-3
doi: 10.1016/j.media.2022.102696
pmc: PMC9829456
mid: NIHMS1856208
pii:
doi:

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, U.S. Gov't, Non-P.H.S.

Langues

eng

Sous-ensembles de citation

IM

Pagination

102696

Subventions

Organisme : NINDS NIH HHS
ID : R42 NS086295
Pays : United States
Organisme : NIBIB NIH HHS
ID : R01 EB021396
Pays : United States
Organisme : NIBIB NIH HHS
ID : R01 EB021391
Pays : United States
Organisme : NIMH NIH HHS
ID : R42 MH118845
Pays : United States
Organisme : NICHD NIH HHS
ID : U54 HD079124
Pays : United States
Organisme : NCI NIH HHS
ID : R44 CA165621
Pays : United States
Organisme : NICHD NIH HHS
ID : R01 HD055741
Pays : United States

Informations de copyright

Copyright © 2022 Elsevier B.V. All rights reserved.

Déclaration de conflit d'intérêts

Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

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Auteurs

Samuel Gerber (S)

Kitware Inc., NC, USA.

Marc Niethammer (M)

University of North Carolina, Chapel Hill, NC, USA.

Ebrahim Ebrahim (E)

Kitware Inc., NC, USA. Electronic address: ebrahim.ebrahim@kitware.com.

Joseph Piven (J)

University of North Carolina, Chapel Hill, NC, USA.

Stephen R Dager (SR)

University of Washington, Seattle, WA, USA.

Martin Styner (M)

University of North Carolina, Chapel Hill, NC, USA.

Stephen Aylward (S)

Kitware Inc., NC, USA.

Andinet Enquobahrie (A)

Kitware Inc., NC, USA.

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Classifications MeSH