Deconvolution of 1D NMR spectra: A deep learning-based approach.
Deconvolution
Deep learning
Machine learning
NMR Spectroscopy
Journal
Journal of magnetic resonance (San Diego, Calif. : 1997)
ISSN: 1096-0856
Titre abrégé: J Magn Reson
Pays: United States
ID NLM: 9707935
Informations de publication
Date de publication:
Feb 2023
Feb 2023
Historique:
received:
21
10
2022
revised:
01
12
2022
accepted:
04
12
2022
pubmed:
24
12
2022
medline:
24
12
2022
entrez:
23
12
2022
Statut:
ppublish
Résumé
The analysis of nuclear magnetic resonance (NMR) spectra to detect peaks and characterize their parameters, often referred to as deconvolution, is a crucial step in the quantification, elucidation, and verification of the structure of molecular systems. However, deconvolution of 1D NMR spectra is a challenge for both experts and machines. We propose a robust, expert-level quality deep learning-based deconvolution algorithm for 1D experimental NMR spectra. The algorithm is based on a neural network trained on synthetic spectra. Our customized pre-processing and labeling of the synthetic spectra enable the estimation of critical peak parameters. Furthermore, the neural network model transfers well to the experimental spectra and demonstrates low fitting errors and sparse peak lists in challenging scenarios such as crowded, high dynamic range, shoulder peak regions as well as broad peaks. We demonstrate in challenging spectra that the proposed algorithm is superior to expert results.
Identifiants
pubmed: 36563418
pii: S1090-7807(22)00215-4
doi: 10.1016/j.jmr.2022.107357
pii:
doi:
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
107357Informations de copyright
Copyright © 2022 The Author(s). Published by Elsevier Inc. All rights reserved.
Déclaration de conflit d'intérêts
Declaration of Competing Interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: All authors except Jan Dirk Wegner, Roland Sigel and Helmut Grabner report financial support was provided by Innosuisse Swiss Innovation Agency. All authors from Bruker Switzerland AG report a relationship with Bruker BioSpin AG that includes: employment.