Crystal structures of 'ALternative Isoinformational ENgineered' DNA in B-form.

ALIEN DNA B-form DNA crystal structures unnatural DNA xNA

Journal

Philosophical transactions of the Royal Society of London. Series B, Biological sciences
ISSN: 1471-2970
Titre abrégé: Philos Trans R Soc Lond B Biol Sci
Pays: England
ID NLM: 7503623

Informations de publication

Date de publication:
27 02 2023
Historique:
entrez: 12 1 2023
pubmed: 13 1 2023
medline: 14 1 2023
Statut: ppublish

Résumé

The first structural model of duplex DNA reported in 1953 by Watson & Crick presented the double helix in B-form, the form that genomic DNA exists in much of the time. Thus, artificial DNA seeking to mimic the properties of natural DNA should also be able to adopt B-form. Using a host-guest system in which Moloney murine leukemia virus reverse transcriptase serves as the host and DNA as the guests, we determined high-resolution crystal structures of three complexes including 5'-CTT

Identifiants

pubmed: 36633282
doi: 10.1098/rstb.2022.0028
pmc: PMC9835606
doi:

Substances chimiques

DNA 9007-49-2
Oligonucleotides 0

Types de publication

Journal Article Research Support, U.S. Gov't, Non-P.H.S.

Langues

eng

Sous-ensembles de citation

IM

Pagination

20220028

Références

J Am Chem Soc. 2018 Sep 19;140(37):11655-11660
pubmed: 30148365
Proteins. 2004 Oct 1;57(1):15-26
pubmed: 15326591
Science. 1989 Jul 28;245(4916):371-8
pubmed: 2667136
Nucleic Acids Res. 2003 Sep 1;31(17):5108-21
pubmed: 12930962
J Am Chem Soc. 2022 Aug 31;144(34):15603-15611
pubmed: 35969672
Acta Crystallogr D Biol Crystallogr. 2014 Mar;70(Pt 3):752-9
pubmed: 24598744
ACS Synth Biol. 2017 Nov 17;6(11):2118-2129
pubmed: 28752992
J Mol Biol. 2003 Jun 27;330(1):57-74
pubmed: 12818202
Acc Chem Res. 2004 Oct;37(10):784-97
pubmed: 15491125
Acc Chem Res. 2017 Jun 20;50(6):1375-1382
pubmed: 28594167
Biochemistry. 2009 Jun 30;48(25):5943-52
pubmed: 19405506
Nucleic Acids Res. 2005 Jul 27;33(13):4106-16
pubmed: 16049022
J Comput Chem. 2004 Oct;25(13):1605-12
pubmed: 15264254
Biochemistry. 2007 Jun 12;46(23):6944-56
pubmed: 17506529
Acta Crystallogr D Biol Crystallogr. 2000 Sep;56(Pt 9):1120-31
pubmed: 10957631
Nat Protoc. 2008;3(7):1213-27
pubmed: 18600227
Nucleic Acids Res. 2019 Jul 2;47(W1):W26-W34
pubmed: 31114927
J Mol Biol. 2000 Feb 18;296(2):613-32
pubmed: 10669612
Acta Crystallogr D Biol Crystallogr. 1997 May 1;53(Pt 3):240-55
pubmed: 15299926
J Am Chem Soc. 2015 Jun 3;137(21):6947-55
pubmed: 25961938
Proc Natl Acad Sci U S A. 2008 Apr 1;105(13):5052-6
pubmed: 18362349
Acta Crystallogr D Biol Crystallogr. 2001 Sep;57(Pt 9):1238-50
pubmed: 11526315
Acta Crystallogr D Biol Crystallogr. 2001 Oct;57(Pt 10):1373-82
pubmed: 11567148
Acta Crystallogr D Biol Crystallogr. 2004 Dec;60(Pt 12 Pt 1):2126-32
pubmed: 15572765
J Mol Biol. 2000 Jul 21;300(4):819-40
pubmed: 10891271
Acta Crystallogr D Struct Biol. 2019 Oct 1;75(Pt 10):861-877
pubmed: 31588918
Nature. 1980 Oct 23;287(5784):755-8
pubmed: 7432492
Nucleic Acids Res. 2006;34(19):5353-60
pubmed: 17003051
Curr Opin Struct Biol. 1997 Feb;7(1):86-93
pubmed: 9032059
Science. 2019 Feb 22;363(6429):884-887
pubmed: 30792304
J Am Chem Soc. 2006 Jun 21;128(24):7846-54
pubmed: 16771498
Nucleic Acids Res. 2006;34(21):6095-101
pubmed: 17074747

Auteurs

Madhura S Shukla (MS)

Department of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, IN 46202, USA.

Shuichi Hoshika (S)

Foundation for Applied Molecular Evolution, 13709 Progress Boulevard, no. 7, Alachua, FL 32615, USA.

Steven A Benner (SA)

Foundation for Applied Molecular Evolution, 13709 Progress Boulevard, no. 7, Alachua, FL 32615, USA.

Millie M Georgiadis (MM)

Department of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, IN 46202, USA.

Articles similaires

Robotic Surgical Procedures Animals Humans Telemedicine Models, Animal

Odour generalisation and detection dog training.

Lyn Caldicott, Thomas W Pike, Helen E Zulch et al.
1.00
Animals Odorants Dogs Generalization, Psychological Smell
Animals TOR Serine-Threonine Kinases Colorectal Neoplasms Colitis Mice
Animals Tail Swine Behavior, Animal Animal Husbandry

Classifications MeSH