Machine learning approach for quantitative biodosimetry of partial-body or total-body radiation exposures by combining radiation-responsive biomarkers.


Journal

Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288

Informations de publication

Date de publication:
18 01 2023
Historique:
received: 26 08 2022
accepted: 13 01 2023
entrez: 18 1 2023
pubmed: 19 1 2023
medline: 21 1 2023
Statut: epublish

Résumé

During a large-scale radiological event such as an improvised nuclear device detonation, many survivors will be shielded from radiation by environmental objects, and experience only partial-body irradiation (PBI), which has different consequences, compared with total-body irradiation (TBI). In this study, we tested the hypothesis that applying machine learning to a combination of radiation-responsive biomarkers (ACTN1, DDB2, FDXR) and B and T cell counts will quantify and distinguish between PBI and TBI exposures. Adult C57BL/6 mice of both sexes were exposed to 0, 2.0-2.5 or 5.0 Gy of half-body PBI or TBI. The random forest (RF) algorithm trained on ½ of the data reconstructed the radiation dose on the remaining testing portion of the data with mean absolute error of 0.749 Gy and reconstructed the product of dose and exposure status (defined as 1.0 × Dose for TBI and 0.5 × Dose for PBI) with MAE of 0.472 Gy. Among irradiated samples, PBI could be distinguished from TBI: ROC curve AUC = 0.944 (95% CI: 0.844-1.0). Mouse sex did not significantly affect dose reconstruction. These results support the hypothesis that combinations of protein biomarkers and blood cell counts can complement existing methods for biodosimetry of PBI and TBI exposures.

Identifiants

pubmed: 36653416
doi: 10.1038/s41598-023-28130-0
pii: 10.1038/s41598-023-28130-0
pmc: PMC9849198
doi:

Substances chimiques

Biomarkers 0

Types de publication

Journal Article Research Support, N.I.H., Extramural

Langues

eng

Sous-ensembles de citation

IM

Pagination

949

Subventions

Organisme : NIAID NIH HHS
ID : U01 AI148309
Pays : United States
Organisme : NIAID NIH HHS
ID : U19 AI067773
Pays : United States

Informations de copyright

© 2023. The Author(s).

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Auteurs

Igor Shuryak (I)

Center for Radiological Research, Columbia University Irving Medical Center, 630 West 168th street, VC-11-234/5, New York, NY, 10032, USA. is144@cumc.columbia.edu.

Leah Nemzow (L)

Center for Radiological Research, Columbia University Irving Medical Center, 630 West 168th street, VC-11-234/5, New York, NY, 10032, USA.

Bezalel A Bacon (BA)

Center for Radiological Research, Columbia University Irving Medical Center, 630 West 168th street, VC-11-234/5, New York, NY, 10032, USA.

Maria Taveras (M)

Center for Radiological Research, Columbia University Irving Medical Center, 630 West 168th street, VC-11-234/5, New York, NY, 10032, USA.

Xuefeng Wu (X)

Center for Radiological Research, Columbia University Irving Medical Center, 630 West 168th street, VC-11-234/5, New York, NY, 10032, USA.

Naresh Deoli (N)

Radiological Research Accelerator Facility, Columbia University Irving Medical Center, Irvington, NY, USA.

Brian Ponnaiya (B)

Radiological Research Accelerator Facility, Columbia University Irving Medical Center, Irvington, NY, USA.

Guy Garty (G)

Radiological Research Accelerator Facility, Columbia University Irving Medical Center, Irvington, NY, USA.

David J Brenner (DJ)

Center for Radiological Research, Columbia University Irving Medical Center, 630 West 168th street, VC-11-234/5, New York, NY, 10032, USA.

Helen C Turner (HC)

Center for Radiological Research, Columbia University Irving Medical Center, 630 West 168th street, VC-11-234/5, New York, NY, 10032, USA.

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Classifications MeSH