Reference-Based RADseq Unravels the Evolutionary History of Polar Species in 'the Crux Lichenologorum' Genus
lichen-forming fungi
next-generation sequencing
phylogenomics
species complex
species delimitation
systematics
Journal
Journal of fungi (Basel, Switzerland)
ISSN: 2309-608X
Titre abrégé: J Fungi (Basel)
Pays: Switzerland
ID NLM: 101671827
Informations de publication
Date de publication:
11 Jan 2023
11 Jan 2023
Historique:
received:
06
12
2022
revised:
03
01
2023
accepted:
08
01
2023
entrez:
21
1
2023
pubmed:
22
1
2023
medline:
22
1
2023
Statut:
epublish
Résumé
Nearly 90% of fungal diversity, one of the most speciose branches in the tree of life, remains undescribed. Lichenized fungi as symbiotic associations are still a challenge for species delimitation, and current species diversity is vastly underestimated. The ongoing democratization of Next-Generation Sequencing is turning the tables. Particularly, reference-based RADseq allows for metagenomic filtering of the symbiont sequence and yields robust phylogenomic trees of closely related species. We implemented reference-based RADseq to disentangle the evolution of neuropogonoid lichens, which inhabit harsh environments and belong to
Identifiants
pubmed: 36675920
pii: jof9010099
doi: 10.3390/jof9010099
pmc: PMC9865703
pii:
doi:
Types de publication
Journal Article
Langues
eng
Subventions
Organisme : Negaunee Foundation, the Grainger Foundation, the Robert A. Pritzker Center for Meteoritics and Polar Studies and Tawani Foundation, and CRYPTOCOVER
ID : CTM2015-64728-C2-1-R
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