A review of ancestrality and admixture in Latin America and the caribbean focusing on native American and African descendant populations.
admixture
global South
global health
population genomics
vulnerable population
Journal
Frontiers in genetics
ISSN: 1664-8021
Titre abrégé: Front Genet
Pays: Switzerland
ID NLM: 101560621
Informations de publication
Date de publication:
2023
2023
Historique:
received:
06
11
2022
accepted:
09
01
2023
entrez:
6
2
2023
pubmed:
7
2
2023
medline:
7
2
2023
Statut:
epublish
Résumé
Genomics can reveal essential features about the demographic evolution of a population that may not be apparent from historical elements. In recent years, there has been a significant increase in the number of studies applying genomic epidemiological approaches to understand the genetic structure and diversity of human populations in the context of demographic history and for implementing precision medicine. These efforts have traditionally been applied predominantly to populations of European origin. More recently, initiatives in the United States and Africa are including more diverse populations, establishing new horizons for research in human populations with African and/or Native ancestries. Still, even in the most recent projects, the under-representation of genomic data from Latin America and the Caribbean (LAC) is remarkable. In addition, because the region presents the most recent global miscegenation, genomics data from LAC may add relevant information to understand population admixture better. Admixture in LAC started during the colonial period, in the 15th century, with intense miscegenation between European settlers, mainly from Portugal and Spain, with local indigenous and sub-Saharan Africans brought through the slave trade. Since, there are descendants of formerly enslaved and Native American populations in the LAC territory; they are considered vulnerable populations because of their history and current living conditions. In this context, studying LAC Native American and African descendant populations is important for several reasons. First, studying human populations from different origins makes it possible to understand the diversity of the human genome better. Second, it also has an immediate application to these populations, such as empowering communities with the knowledge of their ancestral origins. Furthermore, because knowledge of the population genomic structure is an essential requirement for implementing genomic medicine and precision health practices, population genomics studies may ensure that these communities have access to genomic information for risk assessment, prevention, and the delivery of optimized treatment; thus, helping to reduce inequalities in the Western Hemisphere. Hoping to set the stage for future studies, we review different aspects related to genetic and genomic research in vulnerable populations from LAC countries.
Identifiants
pubmed: 36741309
doi: 10.3389/fgene.2023.1091269
pii: 1091269
pmc: PMC9893294
doi:
Types de publication
Journal Article
Review
Langues
eng
Pagination
1091269Informations de copyright
Copyright © 2023 De Oliveira, Secolin and Lopes-Cendes.
Déclaration de conflit d'intérêts
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest. The handling editor MN declared a past co-authorship with the authors ILC & RC.
Références
Front Genet. 2019 Oct 10;10:942
pubmed: 31649725
Proc Natl Acad Sci U S A. 2018 Jul 10;115(28):E6526-E6535
pubmed: 29946025
Am J Hum Genet. 2000 Aug;67(2):444-61
pubmed: 10873790
Lancet. 2006 Jun 3;367(9525):1859-69
pubmed: 16753489
BMC Evol Biol. 2008 Jul 21;8:213
pubmed: 18644108
PLoS One. 2018 Apr 24;13(4):e0196360
pubmed: 29689090
Am J Phys Anthropol. 2014 Dec;155(4):600-9
pubmed: 25229359
Rev Saude Publica. 2004 Oct;38(5):630-6
pubmed: 15499432
Parassitologia. 2002 Dec;44(3-4):137-9
pubmed: 12701374
J Hum Genet. 2008;53(7):662-674
pubmed: 18560750
Hum Genet. 2010 Jun;127(6):629-38
pubmed: 20213474
Obesity (Silver Spring). 2011 Jun;19(6):1244-51
pubmed: 21233811
NPJ Genom Med. 2020 Oct 2;5:42
pubmed: 33083011
Am J Hum Genet. 2011 Mar 11;88(3):254-61
pubmed: 21516613
Am J Phys Anthropol. 2020 Nov;173(3):437-447
pubmed: 32856314
Am J Med Genet C Semin Med Genet. 2020 Dec;184(4):928-938
pubmed: 33205899
Genes (Basel). 2020 Sep 04;11(9):
pubmed: 32899814
Nature. 2015 Jan 15;517(7534):327-32
pubmed: 25470054
Proc Biol Sci. 1997 Aug 22;264(1385):1217-24
pubmed: 9308194
Science. 2009 May 22;324(5930):1035-44
pubmed: 19407144
Proc Natl Acad Sci U S A. 2015 Jul 14;112(28):8696-701
pubmed: 26124090
Sci Rep. 2019 Sep 25;9(1):13900
pubmed: 31554886
Am J Hum Genet. 2007 Jun;80(6):1171-8
pubmed: 17503334
Ann Hum Biol. 2010 Nov;37(6):778-88
pubmed: 20569042
PLoS Genet. 2016 Feb 10;12(2):e1005847
pubmed: 26863142
Am J Hum Genet. 2020 Oct 1;107(4):589-595
pubmed: 33007198
Food Nutr Bull. 2015 Jun;36(2 Suppl):S119-28
pubmed: 26125197
Science. 2022 Apr;376(6588):44-53
pubmed: 35357919
Am J Phys Anthropol. 2002 May;118(1):33-44
pubmed: 11953943
Genes (Basel). 2021 Nov 12;12(11):
pubmed: 34828394
Hum Biol. 1998 Dec;70(6):1001-10
pubmed: 9825592
Proc Natl Acad Sci U S A. 2011 Dec 20;108(51):20444-8
pubmed: 22143784
Am J Hum Genet. 2017 Nov 2;101(5):725-736
pubmed: 29100086
Am J Hum Biol. 2013 Jul-Aug;25(4):480-90
pubmed: 23559443
JAMA Netw Open. 2021 Jan 4;4(1):e2035057
pubmed: 33410879
Int J Legal Med. 2014 Jan;128(1):19-25
pubmed: 23665814
Sci Rep. 2015 Apr 27;5:9812
pubmed: 25913126
Mol Biol Evol. 2019 Dec 1;36(12):2698-2713
pubmed: 31350885
Science. 2012 Oct 12;338(6104):222-6
pubmed: 22936568
Proc Natl Acad Sci U S A. 2010 May 11;107 Suppl 2:8954-61
pubmed: 20445096
Curr Opin Genet Dev. 2020 Jun;62:72-77
pubmed: 32659643
Nat Genet. 2014 Aug;46(8):818-25
pubmed: 24974849
Front Genet. 2021 Sep 23;12:733195
pubmed: 34630523
Hum Biol. 2007 Feb;79(1):51-77
pubmed: 17985656
Health Care Women Int. 2016;37(4):463-77
pubmed: 25203664
Science. 2012 Oct 19;338(6105):374-9
pubmed: 22997136
PLoS Genet. 2014 Sep 25;10(9):e1004572
pubmed: 25254375
Am J Phys Anthropol. 2010 May;142(1):49-66
pubmed: 19918989
Genome Biol Evol. 2019 Sep 1;11(9):2593-2604
pubmed: 31328768
Rev Med Virol. 2023 Jan;33(1):e2378
pubmed: 35818892
Proc Natl Acad Sci U S A. 2015 Mar 24;112(12):3669-73
pubmed: 25755263
Sci Rep. 2020 Aug 26;10(1):14225
pubmed: 32848182
Nature. 2020 May;581(7809):434-443
pubmed: 32461654
Biomedica. 2017 Dec 01;37(4):577-589
pubmed: 29373777
Mol Biol Evol. 2022 Jan 7;39(1):
pubmed: 34875092
Ann Hum Biol. 2013 Jan;40(1):94-8
pubmed: 23151124
Am J Hum Genet. 2001 Jun;68(6):1485-96
pubmed: 11353402
Ann Hum Biol. 2016 Sep;43(5):457-68
pubmed: 26234393
PLoS One. 2021 Apr 8;16(4):e0249773
pubmed: 33831079
Am J Phys Anthropol. 2010 Dec;143(4):591-600
pubmed: 20721944
Mol Biol Evol. 2003 Oct;20(10):1682-91
pubmed: 12832631
Nature. 1991 Aug 15;352(6336):595-600
pubmed: 1865923
Am J Hum Biol. 2015 Sep-Oct;27(5):674-80
pubmed: 25820814
Nat Rev Genet. 2020 Jun;21(6):377-384
pubmed: 32251390
Curr Opin Genet Dev. 2016 Dec;41:106-114
pubmed: 27690355
Obes Rev. 2018 Aug;19(8):1028-1064
pubmed: 29691969
Proc Natl Acad Sci U S A. 2020 Feb 4;117(5):2372-2377
pubmed: 31932419
PLoS One. 2011 Feb 16;6(2):e17063
pubmed: 21359226
Am J Hum Biol. 2014 Mar-Apr;26(2):142-50
pubmed: 24496726
Nature. 2012 Aug 16;488(7411):370-4
pubmed: 22801491
Forensic Sci Int Genet. 2009 Jun;3(3):e71-6
pubmed: 19414155
Cad Saude Publica. 2021 Feb 10;37(2):e00174919
pubmed: 33624738
Pharmgenomics Pers Med. 2018 Apr 10;11:59-66
pubmed: 29692621
Nat Commun. 2018 Dec 19;9(1):5388
pubmed: 30568240
Nature. 2014 Jan 2;505(7481):43-9
pubmed: 24352235
Rev Inst Med Trop Sao Paulo. 2013;55(3):
pubmed: 23740008
Rev Med Panama. 2002;27:5-17
pubmed: 16737193
Nat Commun. 2021 Oct 12;12(1):5942
pubmed: 34642312
PLoS One. 2013;8(3):e58980
pubmed: 23527064
Sci Rep. 2018 Jul 30;8(1):11422
pubmed: 30061702
Forensic Sci Int Genet. 2011 Aug;5(4):e105-7
pubmed: 21481663
Mol Biol Rep. 2016 Dec;43(12):1359-1369
pubmed: 27752939
Hum Immunol. 2016 Jun;77(6):447-8
pubmed: 27060779
Am J Hum Biol. 2010 Jan-Feb;22(1):36-44
pubmed: 19384861
Am J Hum Biol. 2013 Jan-Feb;25(1):35-41
pubmed: 23124977
J Community Genet. 2015 Jul;6(3):185-7
pubmed: 26054699
Front Genet. 2021 Sep 17;12:690366
pubmed: 34650589
South Am Indian Stud. 1994 Mar;(4):18-36
pubmed: 12319064
BMC Infect Dis. 2022 May 17;22(1):473
pubmed: 35581560
Ann Hum Genet. 2006 Sep;70(Pt 5):587-93
pubmed: 16907705
Am J Hum Genet. 2017 Apr 6;100(4):635-649
pubmed: 28366442
BMC Genet. 2012 May 20;13:39
pubmed: 22606979
Am J Phys Anthropol. 2000 Feb;111(2):165-76
pubmed: 10640944
J Hum Genet. 2004;49(9):495-499
pubmed: 15368103
Nature. 2016 Oct 13;538(7624):201-206
pubmed: 27654912
Front Genet. 2022 Mar 03;13:817318
pubmed: 35309125
Ann Hum Genet. 2008 Jan;72(Pt 1):90-8
pubmed: 17908263
Ann Hum Genet. 2018 Sep;82(5):287-299
pubmed: 29774533
Nat Genet. 2019 Apr;51(4):584-591
pubmed: 30926966
PLoS Genet. 2012;8(3):e1002554
pubmed: 22412386
Genome Biol Evol. 2019 Sep 1;11(9):2468-2479
pubmed: 31384924
Proc Natl Acad Sci U S A. 2009 May 26;106(21):8611-6
pubmed: 19433783
Mol Biol Evol. 2020 Apr 1;37(4):994-1006
pubmed: 31848607
Nat Commun. 2015 Mar 17;6:6472
pubmed: 25778948
BMC Evol Biol. 2012 Feb 23;12:24
pubmed: 22360861
PLoS Genet. 2013 Nov;9(11):e1003925
pubmed: 24244192
PLoS One. 2015 Aug 11;10(8):e0134129
pubmed: 26263179
PLoS Genet. 2015 Dec 04;11(12):e1005602
pubmed: 26636962
Forensic Sci Int Genet. 2022 Mar;57:102646
pubmed: 34875492
Nat Commun. 2022 Mar 4;13(1):1004
pubmed: 35246524
PLoS One. 2020 Jul 1;15(7):e0234962
pubmed: 32609747
Hum Genet. 2003 May;112(5-6):534-41
pubmed: 12601469
Nature. 2017 Jan 18;541(7637):302-310
pubmed: 28102248
Nat Rev Genet. 2018 Mar;19(3):175-185
pubmed: 29151588
Int J Legal Med. 2021 Sep;135(5):1773-1776
pubmed: 33742257
PLoS Genet. 2008 Mar 21;4(3):e1000037
pubmed: 18369456
Mol Genet Genomics. 2020 Sep;295(5):1079-1089
pubmed: 32440765
BMC Evol Biol. 2010 Oct 19;10:314
pubmed: 20958967
Genes (Basel). 2020 Nov 13;11(11):
pubmed: 33202852
Ann Hum Genet. 2008 Jan;72(Pt 1):145-56
pubmed: 17725814
Front Genet. 2021 Mar 25;12:636542
pubmed: 33841501
Cad Saude Publica. 2001 Jul-Aug;17(4):949-56
pubmed: 11514876
J Bioeth Inq. 2019 Sep;16(3):323-331
pubmed: 30778904
Nature. 2019 Jun;570(7762):514-518
pubmed: 31217584
Nature. 2015 Oct 15;526(7573):336-42
pubmed: 26469044
Proc Natl Acad Sci U S A. 2020 Dec 22;117(51):32557-32565
pubmed: 33277433
Am J Hum Genet. 2000 Mar;66(3):989-98
pubmed: 10712213
Diabetes. 2013 Sep;62(9):3282-91
pubmed: 23903356
Nature. 2015 Oct 1;526(7571):68-74
pubmed: 26432245
Genes (Basel). 2021 Nov 29;12(12):
pubmed: 34946870
Health Aff (Millwood). 2018 May;37(5):780-785
pubmed: 29733732
Nat Commun. 2017 Oct 18;8(1):1005
pubmed: 29044207
Nature. 2016 Oct 12;538(7624):161-164
pubmed: 27734877
Science. 2010 May 7;328(5979):710-722
pubmed: 20448178
Dev World Bioeth. 2020 Dec;20(4):209-215
pubmed: 32573063
Hum Genome Var. 2016 Jun 30;3:16016
pubmed: 27408750
Am J Hum Genet. 2022 Dec 1;109(12):2095-2100
pubmed: 36459976
Hum Hered. 2014;77(1-4):73-86
pubmed: 25060271
Forensic Sci Int. 2007 Sep 13;171(2-3):198-203
pubmed: 16916590
PLoS Genet. 2018 May 24;14(5):e1007385
pubmed: 29795556
Forensic Sci Int Genet. 2013 Sep;7(5):537-42
pubmed: 23948324
BMJ. 2018 Apr 24;361:k1687
pubmed: 29691228
Nature. 2020 Sep;585(7824):184-186
pubmed: 32901124
Am J Hum Biol. 2017 Mar;29(2):
pubmed: 27761960
Cad Saude Publica. 2005 Sep-Oct;21(5):1595-601
pubmed: 16158167
Proc Natl Acad Sci U S A. 2005 Nov 1;102(44):15942-7
pubmed: 16243969
Am J Phys Anthropol. 2013 May;151(1):135-43
pubmed: 23553646
PLoS One. 2010 Nov 15;5(11):e13996
pubmed: 21085596
Am J Hum Biol. 2006 Nov-Dec;18(6):829-37
pubmed: 17039481
Nat Commun. 2016 Oct 11;7:12522
pubmed: 27725671
PLoS Genet. 2014 Jul 24;10(7):e1004488
pubmed: 25058410
Nature. 2008 Feb 21;451(7181):998-1003
pubmed: 18288195
Am J Hum Genet. 2020 Aug 6;107(2):265-277
pubmed: 32707084
Cad Saude Publica. 2005 Sep-Oct;21(5):1602-8
pubmed: 16158168
Front Genet. 2021 Jul 08;12:672304
pubmed: 34306016
Curr Biol. 2019 Jan 7;29(1):149-157.e3
pubmed: 30581024
Ann Hum Biol. 2011 Jan;38(1):76-83
pubmed: 20969509
J Community Genet. 2017 Oct;8(4):255-266
pubmed: 28770442
Int J Hypertens. 2012;2012:859219
pubmed: 23056922
Annu Rev Genomics Hum Genet. 2019 Aug 31;20:495-517
pubmed: 30892943
Hum Genome Var. 2015 Nov 26;2:15050
pubmed: 27081555
Hum Mol Genet. 2014 Jan 1;23(1):259-67
pubmed: 23966204
N Engl J Med. 2019 Aug 15;381(7):668-676
pubmed: 31412182
Mol Biol Evol. 2017 Mar 1;34(3):559-574
pubmed: 28100790
PLoS Negl Trop Dis. 2008 Sep 24;2(9):e300
pubmed: 18820747
Am J Hum Genet. 2022 Jun 2;109(6):1117-1139
pubmed: 35588731
Front Genet. 2022 Jan 03;12:719791
pubmed: 35046991
Genome Biol Evol. 2020 Sep 1;12(9):1579-1590
pubmed: 32835369
PLoS One. 2015 Apr 07;10(4):e0121557
pubmed: 25849546
Front Public Health. 2022 Mar 30;10:871865
pubmed: 35433598
WorldAIDS. 1993 May;(27):5-9
pubmed: 12286458
Am J Hum Biol. 2004 May-Jun;16(3):264-77
pubmed: 15101052
Ethn Dis. 2019 Dec 12;29(Suppl 3):659-668
pubmed: 31889771