Plasma nanoDSF Denaturation Profile at Baseline Is Predictive of Glioblastoma EGFR Status.

biomarker cancer differential scanning fluorimetry glioblastoma machine learning neuro-oncology neurophysiopathology plasma profiling

Journal

Cancers
ISSN: 2072-6694
Titre abrégé: Cancers (Basel)
Pays: Switzerland
ID NLM: 101526829

Informations de publication

Date de publication:
26 Jan 2023
Historique:
received: 09 10 2022
revised: 05 01 2023
accepted: 18 01 2023
entrez: 11 2 2023
pubmed: 12 2 2023
medline: 12 2 2023
Statut: epublish

Résumé

Glioblastoma (GBM) is the most frequent and aggressive primary brain tumor in adults. Recently, we demonstrated that plasma denaturation profiles of glioblastoma patients obtained using Differential Scanning Fluorimetry can be automatically distinguished from healthy controls with the help of Artificial Intelligence (AI). Here, we used a set of machine-learning algorithms to automatically classify plasma denaturation profiles of glioblastoma patients according to their EGFR status. We found that Adaboost AI is able to discriminate

Identifiants

pubmed: 36765718
pii: cancers15030760
doi: 10.3390/cancers15030760
pmc: PMC9913157
pii:
doi:

Types de publication

Journal Article

Langues

eng

Subventions

Organisme : Cancéropôle PACA
ID : Recherche Translationnelle - GPP
Organisme : French National Alliance for Life Sciences and Health
ID : ITMO Cancer MIC - AI4OP
Organisme : French National Cancer Institute
ID : INCa-DGOS-Inserm_12560

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Auteurs

Rémi Eyraud (R)

Laboratoire Hubert Curien UMR 5516, UJM-Saint-Etienne, University Lyon, CNRS, 42000 Saint Etienne, France.

Stéphane Ayache (S)

LIS, Aix Marseille Univ, CNRS, 13288 Marseille, France.

Philipp O Tsvetkov (PO)

Inst Neurophysiopathol, INP, Faculté des Sciences Médicales et Paramédicales, Aix Marseille Univ, CNRS, 13005 Marseille, France.
Plateforme Interactome Timone, PINT, Faculté des Sciences Médicales et Paramédicales, Aix Marseille Univ, 13005 Marseille, France.

Shanmugha Sri Kalidindi (SS)

Laboratoire Hubert Curien UMR 5516, UJM-Saint-Etienne, University Lyon, CNRS, 42000 Saint Etienne, France.

Viktoriia E Baksheeva (VE)

Inst Neurophysiopathol, INP, Faculté des Sciences Médicales et Paramédicales, Aix Marseille Univ, CNRS, 13005 Marseille, France.

Sébastien Boissonneau (S)

Department of Neuro-Surgery, Timone Hospital, APHM, 13005 Marseille, France.

Carine Jiguet-Jiglaire (C)

Inst Neurophysiopathol, INP, Faculté des Sciences Médicales et Paramédicales, Aix Marseille Univ, CNRS, 13005 Marseille, France.
Department of Anatomopathology, Timone Hospital, APHM, 13005 Marseille, France.

Romain Appay (R)

Inst Neurophysiopathol, INP, Faculté des Sciences Médicales et Paramédicales, Aix Marseille Univ, CNRS, 13005 Marseille, France.
Department of Anatomopathology, Timone Hospital, APHM, 13005 Marseille, France.

Isabelle Nanni-Metellus (I)

Department of Molecular Oncology, APHM, 13016 Marseille, France.

Olivier Chinot (O)

Inst Neurophysiopathol, INP, Faculté des Sciences Médicales et Paramédicales, Aix Marseille Univ, CNRS, 13005 Marseille, France.
Service de Neurooncologie, CHU Timone, APHM, 13005 Marseille, France.

François Devred (F)

Inst Neurophysiopathol, INP, Faculté des Sciences Médicales et Paramédicales, Aix Marseille Univ, CNRS, 13005 Marseille, France.
Plateforme Interactome Timone, PINT, Faculté des Sciences Médicales et Paramédicales, Aix Marseille Univ, 13005 Marseille, France.

Emeline Tabouret (E)

Inst Neurophysiopathol, INP, Faculté des Sciences Médicales et Paramédicales, Aix Marseille Univ, CNRS, 13005 Marseille, France.
Service de Neurooncologie, CHU Timone, APHM, 13005 Marseille, France.

Classifications MeSH