It's the Wrong Virus: Rapid Adaptation of Operations Inside a Highly Pathogenic Avian Influenza Select Agent Laboratory in Response to the 2019 SARS-CoV-2 Pandemic.

IBC SARS-CoV-2 biorisk management hamster inactivation influenza

Journal

Applied biosafety : journal of the American Biological Safety Association
ISSN: 2470-1246
Titre abrégé: Appl Biosaf
Pays: United States
ID NLM: 101122979

Informations de publication

Date de publication:
01 Jun 2022
Historique:
entrez: 13 2 2023
pubmed: 14 2 2023
medline: 14 2 2023
Statut: ppublish

Résumé

The Animal Biosafety Level 3 Enhanced (ABSL-3+) laboratory at St. Jude Children's Research Hospital has a long history of influenza pandemic preparedness. The emergence of SARS-CoV-2 and subsequent expansion into a pandemic has put new and unanticipated demands on laboratory operations since April 2020. Administrative changes, investigative methods requiring increased demand for inactivation and validation of sample removal, and the adoption of a new animal model into the space required all arms of our Biorisk Management System (BMS) to respond with speed and innovation. In this report, we describe the outcomes of three major operational changes that were implemented to adapt the ABSL-3+ select agent space into a multipathogen laboratory. First were administrative controls that were revised and developed with new Institutional Biosafety Committee protocols, laboratory space segregation, training of staff, and occupational health changes for potential exposure to SARS-CoV-2 inside the laboratory. Second were extensive inactivation and validation experiments performed for both highly pathogenic avian influenza and SARS-CoV-2 to meet the demands for sample removal to a lower biosafety level. Third was the establishment of a new caging system to house Syrian Golden hamsters for SARS-CoV-2 risk assessment modeling. The demands placed on biocontainment laboratories for response to SARS-CoV-2 has highlighted the importance of a robust BMS. In a relatively short time, the ABSL-3+ was able to adapt from a single select agent space to a multipathogen laboratory and expand our pandemic response capacity.

Sections du résumé

Background UNASSIGNED
The Animal Biosafety Level 3 Enhanced (ABSL-3+) laboratory at St. Jude Children's Research Hospital has a long history of influenza pandemic preparedness. The emergence of SARS-CoV-2 and subsequent expansion into a pandemic has put new and unanticipated demands on laboratory operations since April 2020. Administrative changes, investigative methods requiring increased demand for inactivation and validation of sample removal, and the adoption of a new animal model into the space required all arms of our Biorisk Management System (BMS) to respond with speed and innovation.
Results UNASSIGNED
In this report, we describe the outcomes of three major operational changes that were implemented to adapt the ABSL-3+ select agent space into a multipathogen laboratory. First were administrative controls that were revised and developed with new Institutional Biosafety Committee protocols, laboratory space segregation, training of staff, and occupational health changes for potential exposure to SARS-CoV-2 inside the laboratory. Second were extensive inactivation and validation experiments performed for both highly pathogenic avian influenza and SARS-CoV-2 to meet the demands for sample removal to a lower biosafety level. Third was the establishment of a new caging system to house Syrian Golden hamsters for SARS-CoV-2 risk assessment modeling.
Summary UNASSIGNED
The demands placed on biocontainment laboratories for response to SARS-CoV-2 has highlighted the importance of a robust BMS. In a relatively short time, the ABSL-3+ was able to adapt from a single select agent space to a multipathogen laboratory and expand our pandemic response capacity.

Identifiants

pubmed: 36776748
doi: 10.1089/apb.2021.0030
pii: 10.1089/apb.2021.0030
pmc: PMC9908283
doi:

Types de publication

Journal Article

Langues

eng

Pagination

58-63

Informations de copyright

Copyright 2022, ABSA International 2022.

Déclaration de conflit d'intérêts

No competing financial interests exist.

Références

Biopreserv Biobank. 2013 Aug;11(4):229-34
pubmed: 24845590
Zoonoses Public Health. 2007;54(2):51-68
pubmed: 17348909
Virol J. 2013 Sep 15;10:289
pubmed: 24034697
Front Bioeng Biotechnol. 2021 Aug 13;9:720315
pubmed: 34485259
Viruses. 2020 Jun 08;12(6):
pubmed: 32521706
Avian Dis. 2008 Mar;52(1):118-23
pubmed: 18459307
J Immunol Methods. 1986 Jan 22;86(1):143-9
pubmed: 3003200
J Virol Methods. 2012 Feb;179(2):409-13
pubmed: 22108429
Avian Pathol. 2004 Oct;33(5):512-8
pubmed: 15545031
Viruses. 2020 Jul 07;12(7):
pubmed: 32646015
Clin Infect Dis. 2020 Nov 19;71(16):2139-2149
pubmed: 32472679
J Virol Methods. 2018 Jan;251:1-6
pubmed: 28969954
Nature. 2020 Jul;583(7818):834-838
pubmed: 32408338
J Histochem Cytochem. 1985 Aug;33(8):845-53
pubmed: 3894502
Viruses. 2020 Jun 06;12(6):
pubmed: 32517266
Proc Natl Acad Sci U S A. 2020 Jul 14;117(28):16587-16595
pubmed: 32571934
Emerg Infect Dis. 2016 Jul;22(7):1292-4
pubmed: 27070504
J Infect Dis. 2020 Oct 1;222(9):1462-1467
pubmed: 32798217
J Infect Dis. 2017 Oct 17;216(7):859-866
pubmed: 28961947
Am J Trop Med Hyg. 2021 Apr 20;104(6):2195-2198
pubmed: 33878029

Auteurs

Lisa Kercher (L)

Department of Infectious Diseases and St. Jude Children's Research Hospital, Memphis, Tennessee, USA.

Patrick Seiler (P)

Department of Infectious Diseases and St. Jude Children's Research Hospital, Memphis, Tennessee, USA.

Trushar Jeevan (T)

Department of Infectious Diseases and St. Jude Children's Research Hospital, Memphis, Tennessee, USA.

John Franks (J)

Department of Infectious Diseases and St. Jude Children's Research Hospital, Memphis, Tennessee, USA.

Sanja Trifkovic (S)

Department of Infectious Diseases and St. Jude Children's Research Hospital, Memphis, Tennessee, USA.

Bindumadhav Marathe (B)

Department of Environmental Health and Safety, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.

James Henry (J)

Department of Environmental Health and Safety, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.

James Gaut (J)

Department of Environmental Health and Safety, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.

Richard J Webby (RJ)

Department of Infectious Diseases and St. Jude Children's Research Hospital, Memphis, Tennessee, USA.

Classifications MeSH