Chromosome-level genomes of multicellular algal sisters to land plants illuminate signaling network evolution.

Journal

bioRxiv : the preprint server for biology
Titre abrégé: bioRxiv
Pays: United States
ID NLM: 101680187

Informations de publication

Date de publication:
01 Feb 2023
Historique:
pubmed: 14 2 2023
medline: 14 2 2023
entrez: 13 2 2023
Statut: epublish

Résumé

The filamentous and unicellular algae of the class Zygnematophyceae are the closest algal relatives of land plants. Inferring the properties of the last common ancestor shared by these algae and land plants allows us to identify decisive traits that enabled the conquest of land by plants. We sequenced four genomes of filamentous Zygnematophyceae (three strains of

Identifiants

DOI: 10.1101/2023.01.31.526407 PMID: 36778228 PMC: PMC9915684
pubmed: 36778228
doi: 10.1101/2023.01.31.526407
pmc: PMC9915684
pii:
doi:

Types de publication

Preprint

Langues

eng

Déclaration de conflit d'intérêts

Declaration of Interests The authors declare no competing interests.

Auteurs

Xuehuan Feng (X)

University of Nebraska-Lincoln, Department of Food Science and Technology, Lincoln, NE 68588, USA.
ORCID: 0000-0002-0732-9322

Jinfang Zheng (J)

University of Nebraska-Lincoln, Department of Food Science and Technology, Lincoln, NE 68588, USA.

Iker Irisarri (I)

University of Goettingen, Institute of Microbiology and Genetics, Department of Applied Bioinformatics, Goldschmidtstr. 1, 37077 Goettingen, Germany.
University of Goettingen, Campus Institute Data Science (CIDAS), Goldschmidstr. 1, 37077 Goettingen, Germany.
Section Phylogenomics, Centre for Molecular biodiversity Research, Leibniz Institute for the Analysis of Biodiversity Change (LIB), Zoological Museum Hamburg, Martin-Luther-King-Platz 3, 20146 Hamburg, Germany.
ORCID: 0000-0002-3628-1137

Huihui Yu (H)

University of Nebraska-Lincoln, Center for Plant Science Innovation, Lincoln, NE 68588, USA.
ORCID: 0000-0003-2725-1937

Bo Zheng (B)

University of Nebraska-Lincoln, Department of Food Science and Technology, Lincoln, NE 68588, USA.

Zahin Ali (Z)

Nanyang Technological University, School of Biological Sciences, 60 Nanyang Drive, Singapore 637551, Singapore.

Sophie de Vries (S)

University of Goettingen, Institute of Microbiology and Genetics, Department of Applied Bioinformatics, Goldschmidtstr. 1, 37077 Goettingen, Germany.
ORCID: 0000-0002-5267-8935

Jean Keller (J)

Laboratoire de Recherche en Sciences Végétales (LRSV), Université de Toulouse, CNRS, UPS, INP Toulouse, Castanet-Tolosan, 31326, France.
ORCID: 0000-0002-5198-0331

Janine M R Fürst-Jansen (JMR)

University of Goettingen, Institute of Microbiology and Genetics, Department of Applied Bioinformatics, Goldschmidtstr. 1, 37077 Goettingen, Germany.
ORCID: 0000-0002-5269-8725

Armin Dadras (A)

University of Goettingen, Institute of Microbiology and Genetics, Department of Applied Bioinformatics, Goldschmidtstr. 1, 37077 Goettingen, Germany.
ORCID: 0000-0001-7649-2388

Jaccoline M S Zegers (JMS)

University of Goettingen, Institute of Microbiology and Genetics, Department of Applied Bioinformatics, Goldschmidtstr. 1, 37077 Goettingen, Germany.
ORCID: 0000-0003-0042-8923

Tim P Rieseberg (TP)

University of Goettingen, Institute of Microbiology and Genetics, Department of Applied Bioinformatics, Goldschmidtstr. 1, 37077 Goettingen, Germany.
ORCID: 0000-0003-3548-8475

Amra Dhabalia Ashok (AD)

University of Goettingen, Institute of Microbiology and Genetics, Department of Applied Bioinformatics, Goldschmidtstr. 1, 37077 Goettingen, Germany.
ORCID: 0000-0001-5787-6941

Tatyana Darienko (T)

University of Goettingen, Institute of Microbiology and Genetics, Department of Applied Bioinformatics, Goldschmidtstr. 1, 37077 Goettingen, Germany.
ORCID: 0000-0002-1957-0076

Maaike J Bierenbroodspot (MJ)

University of Goettingen, Institute of Microbiology and Genetics, Department of Applied Bioinformatics, Goldschmidtstr. 1, 37077 Goettingen, Germany.
ORCID: 0000-0002-4460-3394

Lydia Gramzow (L)

University of Jena, Matthias Schleiden Institute / Genetics, 07743, Jena, Germany.
ORCID: 0000-0003-1919-6077

Romy Petroll (R)

Plant Cell Biology, Department of Biology, University of Marburg, Marburg, Germany.
Department of Algal Development and Evolution, Max Planck Institute for Biology Tübingen, Tübingen, Germany.
ORCID: 0000-0003-0165-982X

Fabian B Haas (FB)

Plant Cell Biology, Department of Biology, University of Marburg, Marburg, Germany.
Department of Algal Development and Evolution, Max Planck Institute for Biology Tübingen, Tübingen, Germany.
ORCID: 0000-0002-7711-5282

Noe Fernandez-Pozo (N)

Plant Cell Biology, Department of Biology, University of Marburg, Marburg, Germany.
Institute for Mediterranean and Subtropical Horticulture "La Mayora" (UMA-CSIC).
ORCID: 0000-0002-6489-5566

Orestis Nousias (O)

University of Nebraska-Lincoln, Department of Food Science and Technology, Lincoln, NE 68588, USA.
ORCID: 0000-0001-6644-6599

Tang Li (T)

University of Nebraska-Lincoln, Department of Food Science and Technology, Lincoln, NE 68588, USA.

Elisabeth Fitzek (E)

Computational Biology, Department of Biology, Center for Biotechnology, Bielefeld University, Bielefeld, Germany.
ORCID: 0000-0001-9423-2993

W Scott Grayburn (WS)

Northern Illinois University, Molecular Core Lab, Department of Biological Sciences, DeKalb, IL 60115, USA.
ORCID: 0000-0003-0276-6053

Nina Rittmeier (N)

University of Innsbruck, Department of Botany, Research Group Plant Cell Biology, Sternwartestraße 15, A-6020 Innsbruck, Austria.

Charlotte Permann (C)

University of Innsbruck, Department of Botany, Research Group Plant Cell Biology, Sternwartestraße 15, A-6020 Innsbruck, Austria.

Florian Rümpler (F)

University of Jena, Matthias Schleiden Institute / Genetics, 07743, Jena, Germany.
ORCID: 0000-0003-4986-2595

John M Archibald (JM)

Dalhousie University, Department of Biochemistry and Molecular Biology, 5850 College Street, Halifax NS B3H 4R2, Canada.
ORCID: 0000-0001-7255-780X

Günter Theißen (G)

University of Jena, Matthias Schleiden Institute / Genetics, 07743, Jena, Germany.
ORCID: 0000-0003-4854-8692

Jeffrey P Mower (JP)

University of Nebraska-Lincoln, Center for Plant Science Innovation, Lincoln, NE 68588, USA.
ORCID: 0000-0002-1501-5809

Maike Lorenz (M)

University of Goettingen, Albrecht-von-Haller-Institute for Plant Sciences, Experimental Phycology and Culture Collection of Algae at Goettingen University (EPSAG), Nikolausberger Weg 18, 37073 Goettingen, Germany.
ORCID: 0000-0002-2277-3077

Henrik Buschmann (H)

University of Applied Sciences Mittweida, Faculty of Applied Computer Sciences and Biosciences, Section Biotechnology and Chemistry, Molecular Biotechnology, Technikumplatz 17, 09648 Mittweida, Germany.
ORCID: 0000-0003-3022-6150

Klaus von Schwartzenberg (K)

Universität Hamburg, Institute of Plant Science and Microbiology, Microalgae and Zygnematophyceae Collection Hamburg (MZCH) and Aquatic Ecophysiology and Phycology, Ohnhorststr. 18, 22609, Hamburg, Germany.
ORCID: 0000-0002-2273-9960

Lori Boston (L)

Genome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.

Richard D Hayes (RD)

Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.
ORCID: 0000-0002-5236-7918

Chris Daum (C)

Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.
ORCID: 0000-0003-3895-5892

Kerrie Barry (K)

Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.
ORCID: 0000-0002-8999-6785

Igor V Grigoriev (IV)

Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.
Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Department of Plant and Microbial Biology, University of California Berkeley, Berkeley, CA 94720, USA.
ORCID: 0000-0002-3136-8903

Xiyin Wang (X)

North China University of Science and Technology.

Fay-Wei Li (FW)

Boyce Thompson Institute, Ithaca, NY, USA.
Cornell University, Plant Biology Section, Ithaca, NY, USA.
ORCID: 0000-0002-0076-0152

Stefan A Rensing (SA)

Plant Cell Biology, Department of Biology, University of Marburg, Marburg, Germany.
University of Freiburg, Centre for Biological Signalling Studies (BIOSS), Freiburg, Germany.
ORCID: 0000-0002-0225-873X

Julius Ben Ari (JB)

The Hebrew University of Jerusalem, The Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture, Rehovot 7610000, Israel.

Noa Keren (N)

The Hebrew University of Jerusalem, The Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture, Rehovot 7610000, Israel.

Assaf Mosquna (A)

The Hebrew University of Jerusalem, The Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture, Rehovot 7610000, Israel.
ORCID: 0000-0003-0467-9287

Andreas Holzinger (A)

University of Innsbruck, Department of Botany, Research Group Plant Cell Biology, Sternwartestraße 15, A-6020 Innsbruck, Austria.
ORCID: 0000-0002-7745-3978

Pierre-Marc Delaux (PM)

Laboratoire de Recherche en Sciences Végétales (LRSV), Université de Toulouse, CNRS, UPS, INP Toulouse, Castanet-Tolosan, 31326, France.
ORCID: 0000-0002-6211-157X

Chi Zhang (C)

University of Nebraska-Lincoln, Center for Plant Science Innovation, Lincoln, NE 68588, USA.
University of Nebraska-Lincoln, School of Biological Sciences, Lincoln, NE 68588, USA.
ORCID: 0000-0002-1827-8137

Jinling Huang (J)

State Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, Henan University, Kaifeng, China.
Department of Biology, East Carolina University, Greenville, NC, USA.
ORCID: 0000-0003-4893-4171

Marek Mutwil (M)

Nanyang Technological University, School of Biological Sciences, 60 Nanyang Drive, Singapore 637551, Singapore.
ORCID: 0000-0002-7848-0126

Jan de Vries (J)

University of Goettingen, Institute of Microbiology and Genetics, Department of Applied Bioinformatics, Goldschmidtstr. 1, 37077 Goettingen, Germany.
University of Goettingen, Campus Institute Data Science (CIDAS), Goldschmidstr. 1, 37077 Goettingen, Germany.
University of Goettingen, Goettingen Center for Molecular Biosciences (GZMB), Justus-von-Liebig-Weg 11, 37077 Goettingen, Germany.
ORCID: 0000-0003-3507-5195

Yanbin Yin (Y)

University of Nebraska-Lincoln, Department of Food Science and Technology, Lincoln, NE 68588, USA.
ORCID: 0000-0001-7667-881X

Classifications MeSH