Information Bottleneck Attribution for Visual Explanations of Diagnosis and Prognosis.

Covid-19 Information bottleneck attribution Visual explanations Weakly supervised

Journal

Machine learning in medical imaging. MLMI (Workshop)
Titre abrégé: Mach Learn Med Imaging
Pays: Germany
ID NLM: 101641981

Informations de publication

Date de publication:
Sep 2021
Historique:
entrez: 13 2 2023
pubmed: 1 9 2021
medline: 1 9 2021
Statut: ppublish

Résumé

Visual explanation methods have an important role in the prognosis of the patients where the annotated data is limited or unavailable. There have been several attempts to use gradient-based attribution methods to localize pathology from medical scans without using segmentation labels. This research direction has been impeded by the lack of robustness and reliability. These methods are highly sensitive to the network parameters. In this study, we introduce a robust visual explanation method to address this problem for medical applications. We provide an innovative visual explanation algorithm for general purpose and as an example application we demonstrate its effectiveness for quantifying lesions in the lungs caused by the Covid-19 with high accuracy and robustness without using dense segmentation labels. This approach overcomes the drawbacks of commonly used Grad-CAM and its extended versions. The premise behind our proposed strategy is that the information flow is minimized while ensuring the classifier prediction stays similar. Our findings indicate that the bottleneck condition provides a more stable severity estimation than the similar attribution methods. The source code will be publicly available upon publication.

Identifiants

pubmed: 36780256
doi: 10.1007/978-3-030-87589-3_41
pmc: PMC9921297
mid: NIHMS1871448
doi:

Types de publication

Journal Article

Langues

eng

Pagination

396-405

Subventions

Organisme : NCI NIH HHS
ID : R01 CA240639
Pays : United States
Organisme : NCI NIH HHS
ID : R01 CA246704
Pays : United States

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Auteurs

Ugur Demir (U)

Department of Radiology and BME, Northwestern University, Chicago, IL, USA.

Ismail Irmakci (I)

Department of Radiology and BME, Northwestern University, Chicago, IL, USA.
ECE, Ege University, Izmir, Turkey.

Elif Keles (E)

Department of Radiology and BME, Northwestern University, Chicago, IL, USA.

Ahmet Topcu (A)

Tokat State Hospital, Tokat, Turkey.

Ziyue Xu (Z)

NVIDIA, Bethesda, MD, USA.

Concetto Spampinato (C)

University of Catania, Catania, Italy.

Sachin Jambawalikar (S)

Columbia University Medical Center, New York, NY, USA.

Evrim Turkbey (E)

National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.

Baris Turkbey (B)

National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.

Ulas Bagci (U)

Department of Radiology and BME, Northwestern University, Chicago, IL, USA.

Classifications MeSH