Overcoming resolution loss due to thermal magnetic field fluctuations from phase plates in transmission electron microscopy.


Journal

bioRxiv : the preprint server for biology
Titre abrégé: bioRxiv
Pays: United States
ID NLM: 101680187

Informations de publication

Date de publication:
13 Feb 2023
Historique:
entrez: 24 2 2023
pubmed: 25 2 2023
medline: 25 2 2023
Statut: epublish

Résumé

We identify thermal magnetic field fluctuations, caused by thermal electron motion ("Johnson noise") in electrically conductive materials, as a potential resolution limit in transmission electron microscopy with a phase plate. Specifically, resolution loss can occur if the electron diffraction pattern is magnified to extend phase contrast to lower spatial frequencies, and if conductive materials are placed too close to the electron beam. While our initial implementation of a laser phase plate (LPP) was significantly affected by these factors, a redesign eliminated the problem and brought the performance close to the expected level. The resolution now appears to be limited by residual Johnson noise arising from the electron beam liner tube in the region of the LPP, together with the chromatic aberration of the relay optics. These two factors can be addressed during future development of the LPP.

Identifiants

pubmed: 36824829
doi: 10.1101/2023.02.12.528160
pmc: PMC9949102
pii:
doi:

Types de publication

Preprint

Langues

eng

Subventions

Organisme : NIGMS NIH HHS
ID : F32 GM149186
Pays : United States
Organisme : NIGMS NIH HHS
ID : R01 GM126011
Pays : United States

Commentaires et corrections

Type : UpdateIn

Références

Nat Rev Mol Cell Biol. 2006 Mar;7(3):225-30
pubmed: 16482091
Nat Methods. 2012 Sep;9(9):853-4
pubmed: 22842542
Nature. 2020 Nov;587(7832):152-156
pubmed: 33087931
Cell. 2017 Nov 30;171(6):1229-1231
pubmed: 29195065
J Comput Chem. 2004 Oct;25(13):1605-12
pubmed: 15264254
Methods Enzymol. 2010;483:215-43
pubmed: 20888477
Nat Methods. 2019 Oct;16(10):1016-1020
pubmed: 31562475
J Struct Biol. 2005 Oct;152(1):36-51
pubmed: 16182563
Nature. 2003 Mar 13;422(6928):216-25
pubmed: 12634795
Opt Express. 2017 Jun 26;25(13):14453-14462
pubmed: 28789031
Nat Methods. 2016 Jan;13(1):24-7
pubmed: 27110629
Rev Sci Instrum. 2021 May 1;92(5):053005
pubmed: 34243315
Ultramicroscopy. 2015 Apr;151:199-210
pubmed: 25499019
Sci Rep. 2021 Apr 16;11(1):8395
pubmed: 33863933
Rev Sci Instrum. 2016 Nov;87(11):115110
pubmed: 27910460
Nat Commun. 2021 Jul 15;12(1):4333
pubmed: 34267200
Ultramicroscopy. 2011 Dec;111(12):1688-95
pubmed: 22088443
Rev Sci Instrum. 2013 Nov;84(11):111101
pubmed: 24289381
Phys Rev Lett. 2020 May 1;124(17):174801
pubmed: 32412292
Elife. 2016 Mar 07;5:
pubmed: 26949259
Nat Methods. 2013 Jun;10(6):584-90
pubmed: 23644547
New J Phys. 2010 Jul;12:
pubmed: 20808709
Phys Rev Lett. 2013 Jul 26;111(4):046101
pubmed: 23931384
Proc Natl Acad Sci U S A. 2014 Nov 4;111(44):15635-40
pubmed: 25331897
IUCrJ. 2016 Jan 01;3(Pt 1):3-7
pubmed: 26870375
J Struct Biol. 2012 Dec;180(3):519-30
pubmed: 23000701

Auteurs

Jeremy J Axelrod (JJ)

Department of Physics, University of California Berkeley, Berkeley, CA 94720, USA.
Lawrence Berkeley National Laboratory, One Cyclotron Road, Berkeley, CA 94720, USA.

Petar N Petrov (PN)

Department of Physics, University of California Berkeley, Berkeley, CA 94720, USA.
Lawrence Berkeley National Laboratory, One Cyclotron Road, Berkeley, CA 94720, USA.

Jessie T Zhang (JT)

Department of Physics, University of California Berkeley, Berkeley, CA 94720, USA.

Jonathan Remis (J)

Department of Physics, University of California Berkeley, Berkeley, CA 94720, USA.
Lawrence Berkeley National Laboratory, One Cyclotron Road, Berkeley, CA 94720, USA.

Bart Buijsse (B)

Thermo Fisher Scientific, Achtseweg Noord 5, 5651 GG, Eindhoven, the Netherlands.

Robert M Glaeser (RM)

Lawrence Berkeley National Laboratory, One Cyclotron Road, Berkeley, CA 94720, USA.
Department of Molecular and Cell Biology, University of California Berkeley, Berkeley, CA 94720, USA.

Holger Mȕller (H)

Department of Physics, University of California Berkeley, Berkeley, CA 94720, USA.
Lawrence Berkeley National Laboratory, One Cyclotron Road, Berkeley, CA 94720, USA.

Classifications MeSH