Gene Expression-Based Molecular Test as Diagnostic Aid for the Differential Diagnosis of Psoriasis and Eczema in Formalin-Fixed and Paraffin-Embedded Tissue, Microbiopsies, and Tape Strips.


Journal

The Journal of investigative dermatology
ISSN: 1523-1747
Titre abrégé: J Invest Dermatol
Pays: United States
ID NLM: 0426720

Informations de publication

Date de publication:
08 2023
Historique:
received: 20 10 2022
revised: 28 01 2023
accepted: 14 02 2023
medline: 18 7 2023
pubmed: 9 3 2023
entrez: 8 3 2023
Statut: ppublish

Résumé

Highly effective targeted therapies are available to treat noncommunicable chronic inflammatory skin diseases. In contrast, the exact diagnosis of noncommunicable chronic inflammatory skin diseases is complicated by its complex pathogenesis and clinical and histological overlap. Particularly, the differential diagnosis of psoriasis and eczema can be challenging in some cases, and molecular diagnostic tools need to be developed to support a gold standard diagnosis. The aim of this work was to develop a real-time PCR-based molecular classifier to distinguish psoriasis from eczema in formalin-fixed and paraffin-embedded-fixed skin samples and to evaluate the use of minimally invasive microbiopsies and tape strips for molecular diagnosis. In this study, we present a formalin-fixed and paraffin-embedded-based molecular classifier that determines the probability for psoriasis with a sensitivity/specificity of 92%/100%, respectively, and an area under the curve of 0.97, delivering comparable results to our previous published RNAprotect-based molecular classifier. The psoriasis probability, as well as levels of NOS2 expression, positively correlated with the disease hallmarks of psoriasis and negatively with eczema hallmarks. Furthermore, minimally invasive tape strips and microbiopsies were effectively used to differentiate psoriasis from eczema. In summary, the molecular classifier offers broad usage in pathology laboratories as well as outpatient settings and can support the differential diagnosis of noncommunicable chronic inflammatory skin diseases on a molecular level using formalin-fixed and paraffin-embedded tissue, microbiopsies, and tape strips.

Identifiants

pubmed: 36889660
pii: S0022-202X(23)00156-2
doi: 10.1016/j.jid.2023.02.015
pii:
doi:

Substances chimiques

Formaldehyde 1HG84L3525

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

1461-1469.e5

Informations de copyright

Copyright © 2023 The Authors. Published by Elsevier Inc. All rights reserved.

Auteurs

Felix Fischer (F)

Institute of Computational Biology, Helmholtz Center Munich, Neuherberg, Germany.

Anais Doll (A)

Department of Dermatology and Allergy, Technical University of Munich, Munich, Germany.

Deniz Uereyener (D)

Institute of Computational Biology, Helmholtz Center Munich, Neuherberg, Germany.

Sophie Roenneberg (S)

Department of Dermatology and Allergy, Technical University of Munich, Munich, Germany.

Christina Hillig (C)

Institute of Computational Biology, Helmholtz Center Munich, Neuherberg, Germany.

Lucca Weber (L)

Dermagnostix GmbH, Freiburg, Germany.

Verena Hackert (V)

Dermagnostix GmbH, Freiburg, Germany.

Martin Meinel (M)

Institute of Computational Biology, Helmholtz Center Munich, Neuherberg, Germany.

Ali Farnoud (A)

Institute of Computational Biology, Helmholtz Center Munich, Neuherberg, Germany.

Peter Seiringer (P)

Department of Dermatology and Allergy, Technical University of Munich, Munich, Germany.

Jenny Thomas (J)

ZAUM-Center of Allergy and Environment, Technical University of Munich and Helmholtz Center Munich, Munich, Germany.

Philipp Anand (P)

Department of Dermatology and Allergy, Technical University of Munich, Munich, Germany.

Larissa Graner (L)

Hahn-Schickard, Freiburg, Germany.

Franziska Schlenker (F)

Hahn-Schickard, Freiburg, Germany.

Roland Zengerle (R)

Laboratory for MEMS Applications, Department of Microsystems Engineering - IMTEK, University of Freiburg, Freiburg, Germany; Hahn-Schickard, Freiburg, Germany.

Pontus Jonsson (P)

Karolinska Universitetssjukhuset - Hudkliniken Stockholm, Stockholm, Sweden.

Manja Jargosch (M)

Department of Dermatology and Allergy, Technical University of Munich, Munich, Germany; ZAUM-Center of Allergy and Environment, Technical University of Munich and Helmholtz Center Munich, Munich, Germany.

Fabian J Theis (FJ)

Institute of Computational Biology, Helmholtz Center Munich, Neuherberg, Germany; Department of Mathematics, Technical University of Munich, Garching, Germany.

Carsten B Schmidt-Weber (CB)

ZAUM-Center of Allergy and Environment, Technical University of Munich and Helmholtz Center Munich, Munich, Germany.

Tilo Biedermann (T)

Department of Dermatology and Allergy, Technical University of Munich, Munich, Germany.

Michael Howell (M)

DermTech, San Diego, California, USA.

Kristian Reich (K)

Translational Research in Inflammatory Skin Diseases, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.

Kilian Eyerich (K)

Klinik für Dermatologie und Venerologie, Universitätsklinikum Freiburg, Freiburg, Germany.

Michael Menden (M)

Institute of Computational Biology, Helmholtz Center Munich, Neuherberg, Germany.

Natalie Garzorz-Stark (N)

Department of Dermatology and Allergy, Technical University of Munich, Munich, Germany.

Felix Lauffer (F)

Department of Dermatology and Allergy, Technical University of Munich, Munich, Germany.

Stefanie Eyerich (S)

ZAUM-Center of Allergy and Environment, Technical University of Munich and Helmholtz Center Munich, Munich, Germany. Electronic address: stefanie.eyerich@tum.de.

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