Live tracking metabolic networks and physiological responses within microbial assemblages at single-cell level.
carbon fixation
microbial interactions
nitrogen fixation
single-cell Raman spectroscopy
stable isotope probing
Journal
PNAS nexus
ISSN: 2752-6542
Titre abrégé: PNAS Nexus
Pays: England
ID NLM: 9918367777906676
Informations de publication
Date de publication:
Mar 2023
Mar 2023
Historique:
received:
19
08
2022
revised:
27
12
2022
accepted:
03
01
2023
entrez:
10
3
2023
pubmed:
11
3
2023
medline:
11
3
2023
Statut:
epublish
Résumé
Microbial interactions impact the functioning of both natural and engineered systems, yet our ability to directly monitor these highly dynamic and spatially resolved interactions in living cells is very limited. Here, we developed a synergistic approach coupling single-cell Raman microspectroscopy with
Identifiants
pubmed: 36896131
doi: 10.1093/pnasnexus/pgad006
pii: pgad006
pmc: PMC9991459
doi:
Types de publication
Journal Article
Langues
eng
Pagination
pgad006Informations de copyright
© The Author(s) 2023. Published by Oxford University Press on behalf of National Academy of Sciences.
Références
Biosci Rep. 1997 Jun;17(3):303-17
pubmed: 9337485
ISME J. 2016 Feb;10(2):450-9
pubmed: 26262817
ISME J. 2017 Mar;11(3):641-650
pubmed: 27922602
ISME J. 2020 Dec;14(12):3068-3078
pubmed: 32814866
Environ Sci Technol. 2020 Mar 17;54(6):3539-3548
pubmed: 32083474
Analyst. 2005 Jun;130(6):917-23
pubmed: 15912241
Proc Natl Acad Sci U S A. 2009 Apr 14;106(15):6345-50
pubmed: 19332780
ISME J. 2019 Nov;13(11):2701-2713
pubmed: 31249392
Anal Chem. 2018 Apr 17;90(8):5082-5089
pubmed: 29557648
PLoS One. 2013 Jun 21;8(6):e66060
pubmed: 23805199
Curr Opin Biotechnol. 2016 Oct;41:114-121
pubmed: 27419912
Harmful Algae. 2021 Dec;110:102125
pubmed: 34887005
Anal Chem. 2019 Feb 5;91(3):2239-2246
pubmed: 30608659
Small. 2020 Jul;16(30):e2001172
pubmed: 32519499
Anal Chem. 2017 Jun 20;89(12):6336-6340
pubmed: 28541039
Nat Rev Microbiol. 2012 Jul 16;10(8):538-50
pubmed: 22796884
Anal Chem. 2019 Dec 17;91(24):15345-15354
pubmed: 31714062
Science. 2017 May 5;356(6337):527-531
pubmed: 28450383
Science. 2008 Nov 14;322(5904):1108-9
pubmed: 19008447
Biophys J. 2007 Sep 15;93(6):1885-94
pubmed: 17513350
Curr Opin Biotechnol. 2016 Oct;41:34-42
pubmed: 27149160
Proc Natl Acad Sci U S A. 2015 Jan 13;112(2):E194-203
pubmed: 25550518
Environ Microbiol. 2020 Apr;22(4):1381-1396
pubmed: 32090403
Science. 2020 May 15;368(6492):
pubmed: 32409447
ISME J. 2007 Aug;1(4):354-60
pubmed: 18043646
Nat Commun. 2020 Oct 9;11(1):5104
pubmed: 33037214
ISME J. 2016 Mar;10(3):678-92
pubmed: 26394007
Trends Microbiol. 2017 May;25(5):413-424
pubmed: 28188076
ISME J. 2011 Sep;5(9):1484-93
pubmed: 21451586
Nat Rev Microbiol. 2020 Apr;18(4):241-256
pubmed: 32055027
ISME J. 2016 May;10(5):1240-51
pubmed: 26495994
Bioinformatics. 2013 Apr 15;29(8):1095-7
pubmed: 23422340
Annu Rev Microbiol. 2022 Sep 8;76:597-618
pubmed: 35671534
Biochim Biophys Acta. 1981 Feb 12;634(2):237-48
pubmed: 6781539
Nat Prod Rep. 2018 May 1;35(5):455-488
pubmed: 29799048
Spectrochim Acta A Mol Biomol Spectrosc. 2015;150:373-80
pubmed: 26057091
Science. 2009 Oct 16;326(5951):422-6
pubmed: 19833965
Anal Chem. 2017 Jun 6;89(11):5793-5800
pubmed: 28452221
ISME J. 2010 Sep;4(9):1215-23
pubmed: 20428225
ISME J. 2017 Jun;11(6):1305-1317
pubmed: 28398346
FEMS Microbiol Rev. 2016 Nov 1;40(6):831-854
pubmed: 28204529
Biotechnol Adv. 2019 Nov 1;37(6):107388
pubmed: 31152870
Environ Microbiol. 2007 Aug;9(8):1878-89
pubmed: 17635536
FEMS Microbiol Ecol. 2012 Mar;79(3):594-607
pubmed: 22092489
New Phytol. 2015 Mar;205(4):1537-1551
pubmed: 25382456
Nat Microbiol. 2019 Jun;4(6):1035-1048
pubmed: 30886359
Biochim Biophys Acta Bioenerg. 2019 Jan;1860(1):78-88
pubmed: 30414930
Anal Chem. 2019 Jun 18;91(12):7729-7737
pubmed: 31117406
Nat Microbiol. 2016 Sep 12;1(11):16163
pubmed: 27617976