Artificial Intelligence for Dementia Research Methods Optimization.


Journal

ArXiv
ISSN: 2331-8422
Titre abrégé: ArXiv
Pays: United States
ID NLM: 101759493

Informations de publication

Date de publication:
02 Mar 2023
Historique:
entrez: 13 3 2023
pubmed: 14 3 2023
medline: 14 3 2023
Statut: epublish

Résumé

Machine learning (ML) has been extremely successful in identifying key features from high-dimensional datasets and executing complicated tasks with human expert levels of accuracy or greater. We summarize and critically evaluate current applications of ML in dementia research and highlight directions for future research. We present an overview of ML algorithms most frequently used in dementia research and highlight future opportunities for the use of ML in clinical practice, experimental medicine, and clinical trials. We discuss issues of reproducibility, replicability and interpretability and how these impact the clinical applicability of dementia research. Finally, we give examples of how state-of-the-art methods, such as transfer learning, multi-task learning, and reinforcement learning, may be applied to overcome these issues and aid the translation of research to clinical practice in the future. ML-based models hold great promise to advance our understanding of the underlying causes and pathological mechanisms of dementia.

Identifiants

pubmed: 36911275
pii: 2303.01949
pmc: PMC10002770
pii:

Types de publication

Preprint

Langues

eng

Subventions

Organisme : NIA NIH HHS
ID : RF1 AG055654
Pays : United States

Commentaires et corrections

Type : UpdateIn

Références

Interface Focus. 2013 Apr 6;3(2):20120072
pubmed: 24427524
Brain. 2015 Dec;138(Pt 12):3463-5
pubmed: 26598488
Sci Rep. 2021 Jan 29;11(1):2660
pubmed: 33514817
N Engl J Med. 2019 Apr 4;380(14):1347-1358
pubmed: 30943338
Nat Commun. 2020 Sep 17;11(1):4703
pubmed: 32943643
Cortex. 2020 Aug;129:446-463
pubmed: 32622173
Expert Syst Appl. 2019 Sep 15;130:157-171
pubmed: 31402810
JAMA Netw Open. 2021 Dec 1;4(12):e2136553
pubmed: 34913981
Neuroimage. 2009 Oct 1;47(4):1363-70
pubmed: 19371783
Proc IEEE Int Symp Biomed Imaging. 2011 Mar-Apr;2011:1086-1090
pubmed: 28603581
Neuroimage. 2010 Aug 1;52(1):234-44
pubmed: 20382237
J Alzheimers Dis. 2020;74(1):55-63
pubmed: 31985462
JAMIA Open. 2021 Aug 02;4(3):ooab052
pubmed: 34350389
Ann Neurol. 2016 Jun;79(6):929-39
pubmed: 27016429
Transl Psychiatry. 2020 May 12;10(1):141
pubmed: 32398742
Alzheimers Dement. 2015 Dec;11(12):1489-1499
pubmed: 26093156
Alzheimers Dement. 2013 Sep;9(5):562-71
pubmed: 23159045
Med Image Anal. 2020 Dec;66:101714
pubmed: 33007638
PLOS Digit Health. 2022 Dec 22;1(12):e0000168
pubmed: 36812634
Neuroimage. 2019 Apr 15;190:56-68
pubmed: 29079521
Front Robot AI. 2019 Nov 05;6:108
pubmed: 33501123
IEEE Rev Biomed Eng. 2019;12:19-33
pubmed: 30561351
PLoS One. 2011;6(7):e21896
pubmed: 21814561
Neuroimage. 2015 Jan 1;104:398-412
pubmed: 25312773
Curr Opin Neurol. 2020 Aug;33(4):439-450
pubmed: 32657885
J Alzheimers Dis. 2019;69(4):1171-1182
pubmed: 31104015
J Alzheimers Dis. 2021;79(4):1533-1546
pubmed: 33459714
J Neurosci Methods. 2007 Apr 15;161(2):342-50
pubmed: 17156848
Alzheimers Res Ther. 2017 Jun 17;9(1):43
pubmed: 28623948
Neuroimage Clin. 2014 Aug 28;6:115-25
pubmed: 25379423
J Prev Alzheimers Dis. 2016;3(4):229-235
pubmed: 29034223
PLoS One. 2016 Feb 22;11(2):e0138866
pubmed: 26901338
Alzheimers Dement. 2021 Aug;17(8):1265-1276
pubmed: 33527720
Neuroimage. 2012 Apr 15;60(3):1880-9
pubmed: 22281676
Front Psychiatry. 2021 Jul 22;12:706695
pubmed: 34366938
Front Big Data. 2020 Aug 12;3:24
pubmed: 33693397
Sci Rep. 2020 Nov 23;10(1):20410
pubmed: 33230128
BMJ. 2015 Jun 16;350:h3029
pubmed: 26079686
Neurogenetics. 2017 Jan;18(1):7-22
pubmed: 27709425
Nat Neurosci. 2019 Dec;22(12):2087-2097
pubmed: 31768052
Neurobiol Aging. 2019 Nov;83:42-53
pubmed: 31585366
Sci Data. 2016 Mar 15;3:160018
pubmed: 26978244
Med Res Rev. 2021 May;41(3):1427-1473
pubmed: 33295676
Nat Commun. 2021 Apr 6;12(1):2078
pubmed: 33824310
Med Image Comput Comput Assist Interv. 2016 Oct;9901:79-87
pubmed: 30101233
Methods. 2019 Aug 15;166:40-47
pubmed: 30922998
Trends Pharmacol Sci. 2019 Aug;40(8):577-591
pubmed: 31326235
Neuroscience. 2021 Apr 15;460:43-52
pubmed: 33465405
Alzheimers Dement (N Y). 2021 Oct 14;7(1):e12212
pubmed: 34692985
Alzheimers Dement (Amst). 2015 Oct 03;1(4):455-63
pubmed: 27239524
Neuroimage. 2022 Jun;253:119083
pubmed: 35278709
Alzheimers Res Ther. 2019 Mar 20;11(1):25
pubmed: 30894218
Alzheimers Dement. 2010 Mar;6(2):138-41
pubmed: 20298975
JMIR Med Inform. 2020 Jun 3;8(6):e17819
pubmed: 32490841
Front Neurosci. 2018 Apr 30;12:260
pubmed: 29760643
Neurology. 2015 May 26;84(21):2153-60
pubmed: 25934852
J Med Internet Res. 2016 Dec 16;18(12):e323
pubmed: 27986644
Med Image Comput Comput Assist Interv. 2005;8(Pt 1):392-9
pubmed: 16685870
Front Artif Intell. 2020 Sep 24;3:507973
pubmed: 33733193
Nat Genet. 2018 Aug;50(8):1161-1170
pubmed: 30038395
Alzheimer Dis Assoc Disord. 2007 Jul-Sep;21(3):249-58
pubmed: 17804958
Neuroimage. 2012 Nov 15;63(3):1681-94
pubmed: 22982105
Neuroimaging Clin N Am. 2005 Nov;15(4):869-77, xi-xii
pubmed: 16443497
J Am Med Inform Assoc. 2011 Jul-Aug;18(4):370-5
pubmed: 21672907
BMC Bioinformatics. 2019 Dec 16;20(1):709
pubmed: 31842725
Brain. 2020 May 1;143(5):1315-1331
pubmed: 31891371
Neuroimage. 2019 Apr 1;189:276-287
pubmed: 30654174
Alzheimers Dement. 2017 Jul;13(7):727-738
pubmed: 28183528
Int J Environ Res Public Health. 2022 Apr 15;19(8):
pubmed: 35457705
J Nucl Med. 2016 Feb;57(2):204-7
pubmed: 26585056
BMC Med Genomics. 2019 Oct 30;12(1):150
pubmed: 31666070
iScience. 2020 Nov 05;23(11):101769
pubmed: 33241205
Epidemiology. 2020 Jan;31(1):126-133
pubmed: 31567393
JAMA Netw Open. 2022 Sep 1;5(9):e2233946
pubmed: 36173632
Front Big Data. 2021 May 26;4:613047
pubmed: 34124650
Stem Cell Reports. 2021 Jun 8;16(6):1446-1457
pubmed: 33861989
Med Image Anal. 2021 Jan;67:101848
pubmed: 33091740
Sci Rep. 2021 Oct 22;11(1):20947
pubmed: 34686734
Brain. 2008 Mar;131(Pt 3):681-9
pubmed: 18202106
Alzheimers Dement (N Y). 2020 Aug 27;6(1):e12074
pubmed: 32885026
Sci Rep. 2018 Jul 24;8(1):11173
pubmed: 30042519
Comput Methods Programs Biomed. 2020 Apr;187:105242
pubmed: 31837630
Eur J Epidemiol. 2021 Oct;36(10):1025-1041
pubmed: 34308533
Evol Intell. 2022;15(1):1-22
pubmed: 33425040
Brain. 2020 Jun 1;143(6):1920-1933
pubmed: 32357201
Int J Geriatr Psychiatry. 2019 Jul;34(7):941-949
pubmed: 30854737
Front Big Data. 2021 Jul 12;4:727856
pubmed: 34322667
Psychiatry Res. 2020 Feb;284:112732
pubmed: 31978628
Alzheimers Res Ther. 2021 Sep 28;13(1):162
pubmed: 34583745
Curr Opin Neurol. 2017 Aug;30(4):371-379
pubmed: 28520598
PLoS One. 2018 May 3;13(5):e0195605
pubmed: 29723236
Nat Methods. 2019 Aug;16(8):715-721
pubmed: 31363220
Brain. 2014 Sep;137(Pt 9):2564-77
pubmed: 25012224
Curr Top Med Chem. 2006;6(1):3-18
pubmed: 16454754
Genome Res. 2021 Apr;31(4):721-731
pubmed: 33741685
Nat Commun. 2018 Oct 15;9(1):4273
pubmed: 30323170
Lancet Neurol. 2017 Jan;16(1):55-65
pubmed: 27979356
IEEE Trans Biomed Eng. 2019 Oct;66(10):2924-2935
pubmed: 30762522
Front Hum Neurosci. 2017 Jul 25;11:380
pubmed: 28790908
Comput Med Imaging Graph. 2021 Jun;90:101910
pubmed: 33862355
Alzheimers Dement (Amst). 2018 Aug 11;10:519-535
pubmed: 30364671
Sci Rep. 2019 Feb 13;9(1):1952
pubmed: 30760848
Comput Biol Chem. 2008 Dec;32(6):438-41
pubmed: 18789768
Radiology. 2018 Mar;286(3):800-809
pubmed: 29309734
J Alzheimers Dis. 2015;47(4):939-54
pubmed: 26401773
Neurology. 2016 Oct 25;87(17):1827-1835
pubmed: 27694257
J Alzheimers Dis. 2018;62(4):1827-1839
pubmed: 29614652
Lancet Digit Health. 2020 Oct;2(10):e493
pubmed: 33328046
Proc IEEE Int Symp Biomed Imaging. 2019 Apr;2019:368-371
pubmed: 31803346
Med Image Anal. 2020 Jul;63:101694
pubmed: 32417716
Circulation. 2017 Aug 22;136(8):719-728
pubmed: 28588075
PLoS One. 2019 Feb 14;14(2):e0211558
pubmed: 30763336
Brain. 2009 Nov;132(Pt 11):2932-46
pubmed: 19762452
Front Comput Neurosci. 2019 Oct 16;13:72
pubmed: 31680923
Neurol Clin Pract. 2019 Apr;9(2):109-117
pubmed: 31041124
Sci Rep. 2020 Nov 26;10(1):20630
pubmed: 33244011
Front Aging Neurosci. 2017 Jan 04;8:318
pubmed: 28101051
Nat Commun. 2020 Aug 11;11(1):3923
pubmed: 32782264
Sci Rep. 2020 Jan 28;10(1):1327
pubmed: 31992745
Neuroimage. 2011 Apr 1;55(3):1109-19
pubmed: 21195776
BMC Res Notes. 2011 Aug 17;4:299
pubmed: 21849043
Proc IEEE Int Symp Biomed Imaging. 2015 Apr;2015:985-989
pubmed: 26413209
Dement Neuropsychol. 2011 Oct-Dec;5(4):288-296
pubmed: 29213755
Nat Commun. 2021 Feb 15;12(1):1033
pubmed: 33589615
Front Pharmacol. 2019 Nov 05;10:1303
pubmed: 31749705
ACS Cent Sci. 2018 Feb 28;4(2):268-276
pubmed: 29532027
Alzheimers Dement. 2020 Jul;16(7):965-973
pubmed: 32489019
Nat Med. 2021 May;27(5):871-881
pubmed: 33927414

Auteurs

Magda Bucholc (M)

Cognitive Analytics Research Lab, School of Computing, Engineering & Intelligent Systems, Ulster University, Derry, UK.

Charlotte James (C)

NIHR Bristol Biomedical Research Centre, University Hospitals Bristol and Weston NHS Foundation Trust and University of Bristol, Bristol, UK.

Ahmad Al Khleifat (A)

Department of Basic and Clinical Neuroscience, Institute of Psychiatry, Psychology & Neuroscience, King's College London, London, United Kingdom.

AmanPreet Badhwar (A)

Multiomics Investigation of Neurodegenerative Diseases (MIND) Lab, Centre de Recherche de l'Institut Universitaire de Gériatrie de Montréal, Montréal, Canada.
Institut de génie biomédical, Université de Montréal, Montréal, Canada.
Département de Pharmacologie et Physiologie, Université de Montréal, Montréal, Canada.

Natasha Clarke (N)

Multiomics Investigation of Neurodegenerative Diseases (MIND) Lab, Centre de Recherche de l'Institut Universitaire de Gériatrie de Montréal, Montréal, Canada.

Amir Dehsarvi (A)

Aberdeen Biomedical Imaging Centre, School of Medicine, Medical Sciences, and Nutrition, University of Aberdeen, Aberdeen, UK.

Christopher R Madan (CR)

School of Psychology, University of Nottingham, Nottingham, UK.

Sarah J Marzi (SJ)

UK Dementia Research Institute, Imperial College London, London, UK.
Department of Brain Sciences, Imperial College London, London, UK.

Cameron Shand (C)

Centre for Medical Image Computing, Department of Computer Science, University College London, London, UK.

Brian M Schilder (BM)

UK Dementia Research Institute, Imperial College London, London, UK.
Department of Brain Sciences, Imperial College London, London, UK.

Stefano Tamburin (S)

Department of Neurosciences, Biomedicine and Movement Sciences, University of Verona, Verona, Italy.

Hanz M Tantiangco (HM)

Information School, University of Sheffield, Sheffield, UK.

Ilianna Lourida (I)

University of Exeter Medical School, Exeter, UK.

David J Llewellyn (DJ)

University of Exeter Medical School, Exeter, UK.
The Alan Turing Institute, London, UK.

Janice M Ranson (JM)

University of Exeter Medical School, Exeter, UK.

Classifications MeSH