Benchmark dataset for clot detection in ischemic stroke vessel-based imaging: CODEC-IV.


Journal

NeuroImage
ISSN: 1095-9572
Titre abrégé: Neuroimage
Pays: United States
ID NLM: 9215515

Informations de publication

Date de publication:
01 05 2023
Historique:
received: 31 07 2021
revised: 18 01 2023
accepted: 24 02 2023
medline: 7 4 2023
pubmed: 19 3 2023
entrez: 18 3 2023
Statut: ppublish

Résumé

We present an annotated dataset for the purposes of creating a benchmark in Artificial Intelligence for automated clot detection. While there are commercial tools available for automated clot detection on computed tomographic (CT) angiographs, they have not been compared in a standardized manner whereby accuracy is reported on a publicly available benchmark dataset. Furthermore, there are known difficulties in automated clot detection - namely, cases where there is robust collateral flow, or residual flow and occlusions of the smaller vessels - and it is necessary to drive an initiative to overcome these challenges. Our dataset contains 159 multiphase CTA patient datasets, derived from CTP and annotated by expert stroke neurologists. In addition to images where the clot is marked, the expert neurologists have provided information about clot location, hemisphere and the degree of collateral flow. The data is available on request by researchers via an online form, and we will host a leaderboard where the results of clot detection algorithms on the dataset will be displayed. Participants are invited to submit an algorithm to us for evaluation using the evaluation tool, which is made available at together with the form at https://github.com/MBC-Neuroimaging/ClotDetectEval.

Identifiants

pubmed: 36933627
pii: S1053-8119(23)00131-3
doi: 10.1016/j.neuroimage.2023.119985
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

119985

Informations de copyright

Copyright © 2023. Published by Elsevier Inc.

Auteurs

Freda Werdiger (F)

Melbourne Brain Centre at Royal Melbourne Hospital, Melbourne, Australia; Department of Medicine, University of Melbourne, Melbourne, Australia. Electronic address: freda.werdiger@unimelb.edu.au.

Milanka Visser (M)

Melbourne Brain Centre at Royal Melbourne Hospital, Melbourne, Australia; Department of Medicine, University of Melbourne, Melbourne, Australia.

Andrew Bivard (A)

Melbourne Brain Centre at Royal Melbourne Hospital, Melbourne, Australia; Department of Medicine, University of Melbourne, Melbourne, Australia.

Xingjuan Li (X)

Southwestern Sydney Clinical School, University of New South Wales, Sydney, Australia; Ingham Institute for Applied Medical Research, Liverpool, NSW, Australia.

Sunay Gotla (S)

Apollo Medical Imaging, Melbourne, Australia.

Angelos Sharobeam (A)

Melbourne Brain Centre at Royal Melbourne Hospital, Melbourne, Australia; Department of Medicine, University of Melbourne, Melbourne, Australia.

Michael Valente (M)

Melbourne Brain Centre at Royal Melbourne Hospital, Melbourne, Australia; Department of Medicine, University of Melbourne, Melbourne, Australia.

James Beharry (J)

Melbourne Brain Centre at Royal Melbourne Hospital, Melbourne, Australia.

Vignan Yogendrakumar (V)

Melbourne Brain Centre at Royal Melbourne Hospital, Melbourne, Australia; Department of Medicine, University of Melbourne, Melbourne, Australia.

Mark W Parsons (MW)

Southwestern Sydney Clinical School, University of New South Wales, Sydney, Australia; Ingham Institute for Applied Medical Research, Liverpool, NSW, Australia; Department of Neurology, Liverpool Hospital, NSW, Australia.

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Classifications MeSH