Structural genome variants of

IS elements Pseudomonas aeruginosa genome evolution inversions long-read sequencing recombination sequences

Journal

Frontiers in microbiology
ISSN: 1664-302X
Titre abrégé: Front Microbiol
Pays: Switzerland
ID NLM: 101548977

Informations de publication

Date de publication:
2023
Historique:
received: 11 11 2022
accepted: 20 02 2023
medline: 31 3 2023
entrez: 30 3 2023
pubmed: 31 3 2023
Statut: epublish

Résumé

Plasticity of

Identifiants

pubmed: 36992927
doi: 10.3389/fmicb.2023.1095928
pmc: PMC10040652
doi:

Types de publication

Journal Article

Langues

eng

Pagination

1095928

Informations de copyright

Copyright © 2023 Klockgether, Pust, Davenport, Bunk, Spröer, Overmann and Tümmler.

Déclaration de conflit d'intérêts

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Références

Nat Commun. 2019 May 16;10(1):2182
pubmed: 31097708
Front Microbiol. 2019 Feb 06;10:53
pubmed: 30787911
Environ Microbiol Rep. 2016 Apr;8(2):227-34
pubmed: 26711897
Genome Res. 2017 May;27(5):722-736
pubmed: 28298431
Environ Microbiol Rep. 2015 Dec;7(6):955-60
pubmed: 26419222
Microb Genom. 2020 Jul;6(7):
pubmed: 32584752
Proc Natl Acad Sci U S A. 1995 Feb 14;92(4):1018-22
pubmed: 7862625
J Bacteriol. 1995 Nov;177(22):6585-92
pubmed: 7592437
BMC Bioinformatics. 2009 Dec 15;10:421
pubmed: 20003500
J Bacteriol. 1996 Jan;178(1):85-93
pubmed: 8550447
J Bacteriol. 2004 Jan;186(2):518-34
pubmed: 14702321
J Bacteriol. 2010 Feb;192(4):1113-21
pubmed: 20023018
Front Microbiol. 2011 Jul 13;2:150
pubmed: 21808635
Science. 1987 Jun 12;236(4807):1448-53
pubmed: 3296194
J Bacteriol. 2007 Mar;189(6):2443-59
pubmed: 17194795
Mol Biol Evol. 2015 Oct;32(10):2798-800
pubmed: 26130081
FEMS Microbiol Rev. 2020 Nov 24;44(6):740-762
pubmed: 32990729
J Bacteriol. 2001 Feb;183(3):843-53
pubmed: 11208781
Mol Biol Evol. 2006 Feb;23(2):254-67
pubmed: 16221896
Mol Microbiol. 2003 Jan;47(1):145-58
pubmed: 12492860
Arch Microbiol. 2006 May;185(4):245-54
pubmed: 16474952
Curr Opin Microbiol. 2022 Oct;69:102192
pubmed: 36030622
J Infect Dis. 1994 Dec;170(6):1616-21
pubmed: 7996008
Microb Genom. 2019 Apr;5(4):
pubmed: 30920365
Trends Biotechnol. 2010 Dec;28(12):611-8
pubmed: 20961641
Nat Biotechnol. 2019 May;37(5):540-546
pubmed: 30936562
Appl Environ Microbiol. 1994 Jun;60(6):1734-8
pubmed: 8031075
Genome Biol. 2006;7(10):R90
pubmed: 17038190
Gigascience. 2015 Aug 25;4:39
pubmed: 26336600
BMC Bioinformatics. 2013 Feb 21;14:60
pubmed: 23432962
Nature. 2000 Aug 31;406(6799):959-64
pubmed: 10984043
Proc Natl Acad Sci U S A. 2008 Feb 26;105(8):3100-5
pubmed: 18287045
J Mol Biol. 1997 Aug 22;271(3):386-404
pubmed: 9268667
Microb Genom. 2017 Sep 14;3(10):e000132
pubmed: 29177090
Cell. 1984 May;37(1):67-75
pubmed: 6373014
Proc Natl Acad Sci U S A. 1996 Sep 17;93(19):10303-8
pubmed: 8816795
J Clin Microbiol. 2011 Mar;49(3):993-1003
pubmed: 21227987
Genome Biol Evol. 2019 Jan 1;11(1):109-120
pubmed: 30496396
FEMS Microbiol Lett. 1997 May 1;150(1):149-56
pubmed: 9163919

Auteurs

Jens Klockgether (J)

Department of Pediatric Pneumology, Allergology and Neonatology, Hannover Medical School, Hanover, Germany.

Marie-Madlen Pust (MM)

Department of Pediatric Pneumology, Allergology and Neonatology, Hannover Medical School, Hanover, Germany.

Colin F Davenport (CF)

Department of Pediatric Pneumology, Allergology and Neonatology, Hannover Medical School, Hanover, Germany.

Boyke Bunk (B)

Leibniz Institute DSMZ - German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.

Cathrin Spröer (C)

Leibniz Institute DSMZ - German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.

Jörg Overmann (J)

Leibniz Institute DSMZ - German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.
German Center for Infection Research, Partner Site Hannover-Braunschweig, Braunschweig, Germany.

Burkhard Tümmler (B)

Department of Pediatric Pneumology, Allergology and Neonatology, Hannover Medical School, Hanover, Germany.
German Center for Lung Research, Biomedical Research in Endstage and Obstructive Lung Disease (BREATH), Hannover Medical School, Hanover, Germany.

Classifications MeSH