DeepNAPSI multi-reader nail psoriasis prediction using deep learning.
Journal
Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288
Informations de publication
Date de publication:
01 04 2023
01 04 2023
Historique:
received:
04
01
2023
accepted:
28
03
2023
medline:
4
4
2023
entrez:
3
4
2023
pubmed:
4
4
2023
Statut:
epublish
Résumé
Nail psoriasis occurs in about every second psoriasis patient. Both, finger and toe nails can be affected and also severely destroyed. Furthermore, nail psoriasis is associated with a more severe course of the disease and the development of psoriatic arthritis. User independent quantification of nail psoriasis, however, is challenging due to the heterogeneous involvement of matrix and nail bed. For this purpose, the nail psoriasis severity index (NAPSI) has been developed. Experts grade pathological changes of each nail of the patient leading to a maximum score of 80 for all nails of the hands. Application in clinical practice, however, is not feasible due to the time-intensive manual grading process especially if more nails are involved. In this work we aimed to automatically quantify the modified NAPSI (mNAPSI) of patients using neuronal networks retrospectively. First, we performed photographs of the hands of patients with psoriasis, psoriatic arthritis, and rheumatoid arthritis. In a second step, we collected and annotated the mNAPSI scores of 1154 nail photos. Followingly, we extracted each nail automatically using an automatic key-point-detection system. The agreement among the three readers with a Cronbach's alpha of 94% was very high. With the nail images individually available, we trained a transformer-based neural network (BEiT) to predict the mNAPSI score. The network reached a good performance with an area-under-receiver-operator-curve of 88% and an area-under precision-recall-curve (PR-AUC) of 63%. We could compare the results with the human annotations and achieved a very high positive Pearson correlation of 90% by aggregating the predictions of the network on the test set to the patient-level. Lastly, we provided open access to the whole system enabling the use of the mNAPSI in clinical practice.
Identifiants
pubmed: 37005487
doi: 10.1038/s41598-023-32440-8
pii: 10.1038/s41598-023-32440-8
pmc: PMC10067940
doi:
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
5329Commentaires et corrections
Type : ErratumIn
Informations de copyright
© 2023. The Author(s).
Références
IEEE Trans Pattern Anal Mach Intell. 2017 Jun;39(6):1137-1149
pubmed: 27295650
Br J Dermatol. 2004 Mar;150(3):568-9
pubmed: 15030343
Sci Rep. 2021 May 6;11(1):9697
pubmed: 33958664
J Eur Acad Dermatol Venereol. 2017 May;31(5):843-846
pubmed: 27658350
Rheumatology (Oxford). 2022 Nov 28;61(12):4945-4951
pubmed: 35333316
J Rheumatol. 2007 Jan;34(1):123-9
pubmed: 17216680
J Am Acad Dermatol. 2012 May;66(5):807-12
pubmed: 22243768
J Am Acad Dermatol. 2003 Aug;49(2):206-12
pubmed: 12894066
Arthritis Care Res (Hoboken). 2011 Nov;63 Suppl 11:S64-85
pubmed: 22588772
Nat Rev Rheumatol. 2017 Nov 21;13(12):731-741
pubmed: 29158573
N Engl J Med. 2017 Mar 9;376(10):957-970
pubmed: 28273019
Br J Dermatol. 2018 Mar;178(3):640-649
pubmed: 28722209
J Am Acad Dermatol. 2014 Jun;70(6):1061-6
pubmed: 24698704
Comput Biol Med. 2022 Apr;143:105300
pubmed: 35172223
Front Med (Lausanne). 2022 Mar 10;9:850552
pubmed: 35360728