Unraveling Neuro-Proteogenomic Landscape and Therapeutic Implications for Human Behaviors and Psychiatric Disorders.


Journal

Research square
Titre abrégé: Res Sq
Pays: United States
ID NLM: 101768035

Informations de publication

Date de publication:
31 Mar 2023
Historique:
pubmed: 11 4 2023
medline: 11 4 2023
entrez: 10 4 2023
Statut: epublish

Résumé

Understanding the genetic basis of neuro-related proteins is essential for dissecting the molecular basis of human behavioral traits and the disease etiology of neuropsychiatric disorders. Here, the SCALLOP Consortium conducted a genome-wide association meta-analysis of over 12,500 individuals for 184 neuro-related proteins in human plasma. The analysis identified 117 cis-regulatory protein quantitative trait loci (cis-pQTL) and 166 trans-pQTL. The mapped pQTL capture on average 50% of each protein's heritability. Mendelian randomization analyses revealed multiple proteins showing potential causal effects on neuro-related traits such as sleeping, smoking, feelings, alcohol intake, mental health, and psychiatric disorders. Integrating with established drug information, we validated 13 out of 13 matched combinations of protein targets and diseases or side effects with available drugs, while suggesting hundreds of re-purposing and new therapeutic targets. This consortium effort provides a large-scale proteogenomic resource for biomedical research on human behaviors and other neuro-related phenotypes.

Identifiants

pubmed: 37034613
doi: 10.21203/rs.3.rs-2720355/v1
pmc: PMC10081382
pii:
doi:

Types de publication

Preprint

Langues

eng

Déclaration de conflit d'intérêts

Competing interests statement P.R.H.J.T is a salaried employee of BioAge Labs, Inc. The remaining authors declare no competing financial interests. R.E.M has received a speaker fee from Illumina, is an advisor to the Epigenetic Clock Development Foundation, and a scientific consultant for Optima Partners. E.W. is now an employee of AstraZeneca.

Auteurs

Linda Repetto (L)

Centre for Global Health Research, Usher Institute, University of Edinburgh, Edinburgh, UK.
State Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai, China.
Center for Intelligent Medicine Research, Greater Bay Area Institute of Precision Medicine (Guangzhou), Fudan University, Guangzhou, China.

Jiantao Chen (J)

State Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai, China.
Center for Intelligent Medicine Research, Greater Bay Area Institute of Precision Medicine (Guangzhou), Fudan University, Guangzhou, China.
Biostatistics Group, School of Life Sciences, Sun Yat-sen University, Guangzhou, China.

Zhijian Yang (Z)

State Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai, China.
Center for Intelligent Medicine Research, Greater Bay Area Institute of Precision Medicine (Guangzhou), Fudan University, Guangzhou, China.
Biostatistics Group, School of Life Sciences, Sun Yat-sen University, Guangzhou, China.

Ranran Zhai (R)

State Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai, China.
Center for Intelligent Medicine Research, Greater Bay Area Institute of Precision Medicine (Guangzhou), Fudan University, Guangzhou, China.
Biostatistics Group, School of Life Sciences, Sun Yat-sen University, Guangzhou, China.

Paul R H J Timmers (PRHJ)

Centre for Global Health Research, Usher Institute, University of Edinburgh, Edinburgh, UK.
MRC Human Genetics Unit, MRC Institute of Genetics Molecular Medicine, University of Edinburgh, Edinburgh, UK.

Ting Li (T)

State Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai, China.
Center for Intelligent Medicine Research, Greater Bay Area Institute of Precision Medicine (Guangzhou), Fudan University, Guangzhou, China.
Biostatistics Group, School of Life Sciences, Sun Yat-sen University, Guangzhou, China.

Emma L Twait (EL)

Julius Center for Health Sciences and Primary Care, University Medical Center Utrechtand Utrecht University, Utrecht, Netherlands.

Sebastian May-Wilson (S)

Centre for Global Health Research, Usher Institute, University of Edinburgh, Edinburgh, UK.

Marisa D Muckian (MD)

Centre for Global Health Research, Usher Institute, University of Edinburgh, Edinburgh, UK.

Bram P Prins (BP)

BHF Cardiovascular Epidemiology Unit, Department of Public Health and Primary Care, University of Cambridge, Cambridge, UK.

Grace Png (G)

Institute of Translational Genomics, Helmholtz Zentrum München - German Research Center for Environmental Health, Neuherberg, Germany.
Technical University of Munich (TUM), School of Medicine, 81675 Munich, Germany.

Charles Kooperberg (C)

Division of Public Health Sciences, Fred Hutchinson Cancer Center, Seattle USA.

Åsa Johansson (Å)

Dept. Immunology, Genetics and Pathology, Science for life laboratory, Uppsala University, Sweden.

Robert F Hillary (RF)

Centre for Genomic and Experimental Medicine, Institute of Genetics and Cancer, The University of Edinburgh, Edinburgh, EH4 2XU, United Kingdom.

Eleanor Wheeler (E)

MRC Epidemiology Unit, Institute of Metabolic Science, University of Cambridge School of Clinical Medicine, Cambridge, UK.

Lu Pan (L)

Department of Medical Epidemiology and Biostatistics, Karolinska Institutet, Stockholm, Sweden.

Yazhou He (Y)

Centre for Global Health Research, Usher Institute, University of Edinburgh, Edinburgh, UK.

Sofia Klasson (S)

Institute of Biomedicine, Department of Laboratory Medicine, the Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden.

Shahzad Ahmad (S)

Department of Epidemiology, ErasmusMC, Rotterdam, The Netherlands.

James E Peters (JE)

Department of Immunology and Inflammation, Faculty of Medicine, Imperial College London, London, United Kingdom.

Arthur Gilly (A)

Institute of Translational Genomics, Helmholtz Zentrum München - German Research Center for Environmental Health, Neuherberg, Germany.

Maria Karaleftheri (M)

Echinos Medical Centre, Echinos, Greece.

Emmanouil Tsafantakis (E)

Anogia Medical Centre, Anogia, Greece.

Jeffrey Haessler (J)

Division of Public Health Sciences, Fred Hutchinson Cancer Center, Seattle USA.

Ulf Gyllensten (U)

Dept. Immunology, Genetics and Pathology, Science for life laboratory, Uppsala University, Sweden.

Sarah E Harris (SE)

Lothian Birth Cohorts, University of Edinburgh, Edinburgh, EH8 9JZ, United Kingdom.

Nicholas J Wareham (NJ)

MRC Epidemiology Unit, Institute of Metabolic Science, University of Cambridge School of Clinical Medicine, Cambridge, UK.

Andreas Göteson (A)

Institute of Biomedicine, Department of Laboratory Medicine, the Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden.

Cecilia Lagging (C)

Institute of Biomedicine, Department of Laboratory Medicine, the Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden.
Region Västra Götaland, Sahlgrenska University Hospital, Department of Clinical Genetics and Genomics, Gothenburg, Sweden.

Mohammad Arfan Ikram (MA)

Department of Epidemiology, ErasmusMC, Rotterdam, The Netherlands.

Cornelia M van Duijn (CM)

Department of Epidemiology, ErasmusMC, Rotterdam, The Netherlands.

Christina Jern (C)

Institute of Biomedicine, Department of Laboratory Medicine, the Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden.

Mikael Landén (M)

Department of Medical Epidemiology and Biostatistics, Karolinska Institutet, Stockholm, Sweden.
Institute of Biomedicine, Department of Laboratory Medicine, the Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden.

Claudia Langenberg (C)

MRC Epidemiology Unit, Institute of Metabolic Science, University of Cambridge School of Clinical Medicine, Cambridge, UK.
Computational Medicine, Berlin Institute of Health (BIH) at Charité - Universitätsmedizin Berlin, Germany.

Ian J Deary (IJ)

Lothian Birth Cohorts, University of Edinburgh, Edinburgh, EH8 9JZ, United Kingdom.

Riccardo E Marioni (RE)

Centre for Genomic and Experimental Medicine, Institute of Genetics and Cancer, The University of Edinburgh, Edinburgh, EH4 2XU, United Kingdom.

Stefan Enroth (S)

Dept. Immunology, Genetics and Pathology, Science for life laboratory, Uppsala University, Sweden.

Alexander P Reiner (AP)

Division of Public Health Sciences, Fred Hutchinson Cancer Center and Department of Epidemiology, University of Washington, Seattle USA.

George Dedoussis (G)

Department of Nutrition and Dietetics, School of Health Science and Education, Harokopio University of Athens, Athens, Greece.

Eleftheria Zeggini (E)

Institute of Translational Genomics, Helmholtz Zentrum München - German Research Center for Environmental Health, Neuherberg, Germany.
Technical University of Munich (TUM) and Klinikum Rechts der Isar, TUM School of Medicine, Munich, Germany.

Adam S Butterworth (AS)

BHF Cardiovascular Epidemiology Unit, Department of Public Health and Primary Care, University of Cambridge, Cambridge, UK.
British Heart Foundation Centre of Research Excellence, University of Cambridge, Cambridge, UK.
Health Data Research UK Cambridge, Wellcome Genome Campus and University of Cambridge, Cambridge, UK.
National Institute for Health Research Blood and Transplant Research Unit in Donor Health and Genomics, University of Cambridge, Cambridge, UK.
National Institute for Health Research Cambridge Biomedical Research Centre, University of Cambridge and Cambridge University Hospitals, Cambridge, UK.

Anders Mälarstig (A)

Department of Medical Epidemiology and Biostatistics, Karolinska Institutet, Stockholm, Sweden.
Emerging Science and Innovation, Pfizer Worldwide Research, Development and Medical, Cambridge, UK.

James F Wilson (JF)

Centre for Global Health Research, Usher Institute, University of Edinburgh, Edinburgh, UK.
MRC Human Genetics Unit, MRC Institute of Genetics Molecular Medicine, University of Edinburgh, Edinburgh, UK.

Pau Navarro (P)

Centre for Global Health Research, Usher Institute, University of Edinburgh, Edinburgh, UK.
MRC Human Genetics Unit, MRC Institute of Genetics Molecular Medicine, University of Edinburgh, Edinburgh, UK.

Xia Shen (X)

Centre for Global Health Research, Usher Institute, University of Edinburgh, Edinburgh, UK.
State Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai, China.
Center for Intelligent Medicine Research, Greater Bay Area Institute of Precision Medicine (Guangzhou), Fudan University, Guangzhou, China.
Biostatistics Group, School of Life Sciences, Sun Yat-sen University, Guangzhou, China.
Department of Medical Epidemiology and Biostatistics, Karolinska Institutet, Stockholm, Sweden.

Classifications MeSH