Genome-resolved analyses of oligotrophic groundwater microbial communities along phenol pollution in a continuous-flow biodegradation model system.
biodiversity
bioremediation
metagenome
oligotrophic groundwater
phenol
Journal
Frontiers in microbiology
ISSN: 1664-302X
Titre abrégé: Front Microbiol
Pays: Switzerland
ID NLM: 101548977
Informations de publication
Date de publication:
2023
2023
Historique:
received:
18
01
2023
accepted:
13
03
2023
medline:
18
4
2023
entrez:
17
4
2023
pubmed:
18
4
2023
Statut:
epublish
Résumé
Groundwater pollution is one of the major environmental concerns. The entrance of pollutants into the oligotrophic groundwater ecosystems alters native microbial community structure and metabolism. This study investigated the application of innovative Small Bioreactor Chambers and CaO
Identifiants
pubmed: 37065124
doi: 10.3389/fmicb.2023.1147162
pmc: PMC10090433
doi:
Types de publication
Journal Article
Langues
eng
Pagination
1147162Informations de copyright
Copyright © 2023 Yavari-Bafghi, Rezaei Somee, Amoozegar, Dastgheib and Shavandi.
Déclaration de conflit d'intérêts
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
Références
Nat Commun. 2013;4:2120
pubmed: 23979677
J Hazard Mater. 1999 Oct 1;69(1):25-39
pubmed: 10502604
Sci Rep. 2021 May 31;11(1):11316
pubmed: 34059729
J Hazard Mater. 2017 Sep 5;337:163-177
pubmed: 28525879
J Hazard Mater. 2010 Jun 15;178(1-3):74-80
pubmed: 20122795
J Appl Microbiol. 2010 Dec;109(6):1937-45
pubmed: 21070515
Bioinformatics. 2011 Nov 1;27(21):2957-63
pubmed: 21903629
ISME J. 2017 Oct;11(10):2319-2333
pubmed: 28644444
Appl Environ Microbiol. 2009 May;75(9):2613-20
pubmed: 19270134
J Hazard Mater. 2011 Sep 15;192(3):1437-40
pubmed: 21820243
Nat Methods. 2010 May;7(5):335-6
pubmed: 20383131
Bioinformatics. 2019 Nov 15;:
pubmed: 31730192
Front Microbiol. 2017 Apr 28;8:764
pubmed: 28503173
J Contam Hydrol. 2001 Dec 15;53(3-4):269-84
pubmed: 11820473
mBio. 2018 Nov 20;9(6):
pubmed: 30459191
PeerJ. 2019 Jul 26;7:e7359
pubmed: 31388474
Environ Microbiol. 2012 May;14(5):1091-117
pubmed: 22026719
J Hazard Mater. 2019 Jun 5;371:183-190
pubmed: 30851671
PLoS One. 2013 Apr 18;8(4):e61811
pubmed: 23637911
Bioinformatics. 2015 May 15;31(10):1674-6
pubmed: 25609793
Appl Environ Microbiol. 2005 Feb;71(2):904-11
pubmed: 15691947
J Environ Manage. 2018 May 15;214:157-163
pubmed: 29524671
Environ Int. 2019 Mar;124:265-277
pubmed: 30660027
Sci Total Environ. 2021 Aug 1;780:146459
pubmed: 34030323
Environ Sci Pollut Res Int. 2019 Dec;26(34):35218-35226
pubmed: 31691896
Nat Methods. 2013 Oct;10(10):996-8
pubmed: 23955772
Chemosphere. 2005 Sep;61(1):98-106
pubmed: 16157172
Curr Microbiol. 2009 Aug;59(2):154-9
pubmed: 19452212
Ecotoxicol Environ Saf. 2016 Nov;133:297-305
pubmed: 27479774
Int J Syst Evol Microbiol. 2015 Feb;65(Pt 2):593-597
pubmed: 25406234
Nucleic Acids Res. 2013 Jan;41(Database issue):D590-6
pubmed: 23193283
Bioresour Technol. 2001 Nov;80(2):137-42
pubmed: 11563704
Front Microbiol. 2018 Dec 18;9:3124
pubmed: 30619197
Environ Int. 2020 Apr;137:105550
pubmed: 32086076
Biotechnol Rep (Amst). 2016 Feb 15;10:1-7
pubmed: 28352518
J Hazard Mater. 2008 Apr 15;152(3):1164-70
pubmed: 17804164
Bioresour Technol. 2016 Jan;200:426-34
pubmed: 26512868
Appl Biochem Biotechnol. 2016 Jan;178(2):224-50
pubmed: 26481232
Environ Microbiol. 2018 Jan;20(1):337-354
pubmed: 29160027
PLoS One. 2007 Sep 19;2(9):e914
pubmed: 17878949
Genome Res. 2015 Jul;25(7):1043-55
pubmed: 25977477
J Mol Microbiol Biotechnol. 2016;26(1-3):5-28
pubmed: 26960061
Chemosphere. 2018 Dec;212:105-113
pubmed: 30144671
FEMS Microbiol Ecol. 2019 Jan 1;95(1):
pubmed: 30304451
FEMS Microbiol Ecol. 2008 Nov;66(2):295-305
pubmed: 18803671
Sci Rep. 2019 Feb 4;9(1):1239
pubmed: 30718896
BMC Bioinformatics. 2010 Mar 08;11:119
pubmed: 20211023
Appl Biochem Biotechnol. 2015 Jun;176(3):670-99
pubmed: 25935219
Water Res. 2018 Jul 1;138:118-128
pubmed: 29574199
Bioinformatics. 2014 Jul 15;30(14):2068-9
pubmed: 24642063
Nucleic Acids Res. 2004 Mar 19;32(5):1792-7
pubmed: 15034147
Nucleic Acids Res. 2019 Jan 8;47(D1):D309-D314
pubmed: 30418610
Nat Commun. 2021 Jul 12;12(1):4253
pubmed: 34253732