Structures of factor XI and prekallikrein bound to domain 6 of high-molecular weight kininogen reveal alternate domain 6 conformations and exosites.


Journal

Journal of thrombosis and haemostasis : JTH
ISSN: 1538-7836
Titre abrégé: J Thromb Haemost
Pays: England
ID NLM: 101170508

Informations de publication

Date de publication:
09 2023
Historique:
received: 22 09 2022
revised: 15 03 2023
accepted: 24 03 2023
medline: 21 8 2023
pubmed: 18 4 2023
entrez: 17 4 2023
Statut: ppublish

Résumé

High-molecular weight kininogen (HK) circulates in plasma as a complex with zymogen prekallikrein (PK). HK is both a substrate and a cofactor for activated plasma kallikrein, and the principal exosite interactions occur between PK N-terminal apple domains and the C-terminal D6 domain of HK. To determine the structure of the complex formed between PK apple domains and an HKD6 fragment and compare this with the coagulation factor XI (FXI)-HK complex. We produced recombinant FXI and PK heavy chains (HCs) spanning all 4 apple domains. We cocrystallized PKHC (and subsequently FXIHC) with a 31-amino acid synthetic peptide spanning HK residues Ser565-Lys595 and determined the crystal structure. We also analyzed the full-length FXI-HK complex in solution using hydrogen deuterium exchange mass spectrometry. The 2.3Å PKHC-HK peptide crystal structure revealed that the HKD6 sequence WIPDIQ (Trp569-Gln574) binds to the apple 1 domain and HK FNPISDFPDT (Phe582-Thr591) binds to the apple 2 domain with a flexible intervening sequence resulting in a bent double conformation. A second 3.2Å FXIHC-HK peptide crystal structure revealed a similar interaction with the apple 2 domain but an alternate, straightened conformation of the HK peptide where residues LSFN (Leu579-Asn583) interacts with a unique pocket formed between the apple 2 and 3 domains. HDX-MS of full length FXI-HK complex in solution confirmed interactions with both apple 2 and apple 3. The alternate conformations and exosite binding of the HKD6 peptide likely reflects the diverging relationship of HK to the functions of PK and FXI.

Sections du résumé

BACKGROUND
High-molecular weight kininogen (HK) circulates in plasma as a complex with zymogen prekallikrein (PK). HK is both a substrate and a cofactor for activated plasma kallikrein, and the principal exosite interactions occur between PK N-terminal apple domains and the C-terminal D6 domain of HK.
OBJECTIVES
To determine the structure of the complex formed between PK apple domains and an HKD6 fragment and compare this with the coagulation factor XI (FXI)-HK complex.
METHODS
We produced recombinant FXI and PK heavy chains (HCs) spanning all 4 apple domains. We cocrystallized PKHC (and subsequently FXIHC) with a 31-amino acid synthetic peptide spanning HK residues Ser565-Lys595 and determined the crystal structure. We also analyzed the full-length FXI-HK complex in solution using hydrogen deuterium exchange mass spectrometry.
RESULTS
The 2.3Å PKHC-HK peptide crystal structure revealed that the HKD6 sequence WIPDIQ (Trp569-Gln574) binds to the apple 1 domain and HK FNPISDFPDT (Phe582-Thr591) binds to the apple 2 domain with a flexible intervening sequence resulting in a bent double conformation. A second 3.2Å FXIHC-HK peptide crystal structure revealed a similar interaction with the apple 2 domain but an alternate, straightened conformation of the HK peptide where residues LSFN (Leu579-Asn583) interacts with a unique pocket formed between the apple 2 and 3 domains. HDX-MS of full length FXI-HK complex in solution confirmed interactions with both apple 2 and apple 3.
CONCLUSIONS
The alternate conformations and exosite binding of the HKD6 peptide likely reflects the diverging relationship of HK to the functions of PK and FXI.

Identifiants

pubmed: 37068593
pii: S1538-7836(23)00326-4
doi: 10.1016/j.jtha.2023.03.042
pii:
doi:

Substances chimiques

Kininogen, High-Molecular-Weight 0
Factor XI 9013-55-2
Prekallikrein 9055-02-1
Kininogens 0
Peptides 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

2378-2389

Subventions

Organisme : British Heart Foundation
ID : RG/12/9/29775
Pays : United Kingdom

Commentaires et corrections

Type : CommentIn

Informations de copyright

Crown Copyright © 2023. Published by Elsevier Inc. All rights reserved.

Déclaration de conflit d'intérêts

Declaration of competing interests There are no competing interests to disclose.

Auteurs

Chan Li (C)

Biodiscovery Institute, School of Pharmacy, University of Nottingham, Nottingham, UK.

Awital Bar Barroeta (AB)

Department of Molecular Hematology, Sanquin Research, Amsterdam, The Netherlands.

Szu Shen Wong (SS)

School of Pharmacy and Bioengineering, Keele University, Staffordshire, UK.

Hyo Jung Kim (HJ)

Biodiscovery Institute, School of Pharmacy, University of Nottingham, Nottingham, UK.

Monika Pathak (M)

Biodiscovery Institute, School of Pharmacy, University of Nottingham, Nottingham, UK.

Ingrid Dreveny (I)

Biodiscovery Institute, School of Pharmacy, University of Nottingham, Nottingham, UK.

Joost C M Meijers (JCM)

Department of Molecular Hematology, Sanquin Research, Amsterdam, The Netherlands; Amsterdam UMC, University of Amsterdam, department of Experimental Vascular Medicine, Amsterdam, The Netherlands; Amsterdam Cardiovascular Sciences, Pulmonary Hypertension and Thrombosis, Amsterdam, The Netherlands.

Jonas Emsley (J)

Biodiscovery Institute, School of Pharmacy, University of Nottingham, Nottingham, UK. Electronic address: jonas.emsley@nottingham.ac.uk.

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Classifications MeSH