The

cell specification computational cell biology gene expression pattern formation plant development plant embryogenesis

Journal

Quantitative plant biology
ISSN: 2632-8828
Titre abrégé: Quant Plant Biol
Pays: England
ID NLM: 9918452086906676

Informations de publication

Date de publication:
2021
Historique:
received: 02 11 2020
revised: 15 02 2021
accepted: 21 02 2021
medline: 12 4 2021
pubmed: 12 4 2021
entrez: 20 04 2023
Statut: epublish

Résumé

Phenotypic diversity of flowering plants stems from common basic features of the plant body pattern with well-defined body axes, organs and tissue organisation. Cell division and cell specification are the two processes that underlie the formation of a body pattern. As plant cells are encased into their cellulosic walls, directional cell division through precise positioning of division plane is crucial for shaping plant morphology. Since many plant cells are pluripotent, their fate establishment is influenced by their cellular environment through cell-to-cell signaling. Recent studies show that apart from biochemical regulation, these two processes are also influenced by cell and tissue morphology and operate under mechanical control. Finding a proper model system that allows dissecting the relationship between these aspects is the key to our understanding of pattern establishment. In this review, we present the

Identifiants

pubmed: 37077211
doi: 10.1017/qpb.2021.3
pii: S2632882821000035
pmc: PMC10095805
doi:

Types de publication

Journal Article Review

Langues

eng

Pagination

e3

Informations de copyright

© The Author(s) 2021.

Déclaration de conflit d'intérêts

The authors declare no conflicts of interest.

Références

Front Plant Sci. 2014 Oct 21;5:558
pubmed: 25374575
Plant Cell. 1997 Nov;9(11):1963-71
pubmed: 9401121
Plant Cell. 2019 Dec;31(12):2929-2946
pubmed: 31562217
Nature. 2010 Apr 8;464(7290):913-6
pubmed: 20220754
Plant Cell. 2017 Aug;29(8):1806-1821
pubmed: 28808136
Nat Plants. 2017 Nov;3(11):894-904
pubmed: 29116234
J Comput Biol. 2002;9(1):67-103
pubmed: 11911796
Nature. 2007 Oct 25;449(7165):1053-7
pubmed: 17960244
Trends Plant Sci. 2012 Nov;17(11):666-74
pubmed: 22784824
Elife. 2015 Dec 01;4:e07811
pubmed: 26623515
Plant Cell. 2007 Aug;19(8):2430-9
pubmed: 17704214
Nat Protoc. 2014 Jan;9(1):171-81
pubmed: 24385147
Plant Physiol. 2005 Jun;138(2):624-35
pubmed: 15955926
Elife. 2014 Apr 16;3:e01967
pubmed: 24740969
Curr Biol. 2015 Jun 29;25(13):1746-52
pubmed: 26073136
Mol Syst Biol. 2013 Oct 22;9:699
pubmed: 24150423
Plant Cell Physiol. 2013 Mar;54(3):375-84
pubmed: 23292599
Curr Biol. 2013 Dec 16;23(24):2513-8
pubmed: 24291090
Cell. 2015 May 21;161(5):1202-1214
pubmed: 26000488
Curr Biol. 2012 Aug 21;22(16):1468-76
pubmed: 22818916
Curr Opin Plant Biol. 2013 Feb;16(1):5-10
pubmed: 23287386
Genes Dev. 2001 Oct 15;15(20):2648-53
pubmed: 11641271
Nucleic Acids Res. 2014 Jan;42(Database issue):D68-73
pubmed: 24275495
Plant Physiol. 2014 May 1;165(2):670-687
pubmed: 24784759
Proc Natl Acad Sci U S A. 2008 Mar 18;105(11):4489-94
pubmed: 18337510
Plant Cell. 2005 Jan;17(1):61-76
pubmed: 15598805
Nat Commun. 2019 Nov 8;10(1):5093
pubmed: 31704928
Development. 1993 Sep;119(1):57-70
pubmed: 8275864
Annu Rev Plant Physiol Plant Mol Biol. 1999 Jun;50:505-537
pubmed: 15012218
Cell. 2009 Jun 26;137(7):1320-30
pubmed: 19523675
Nature. 2007 Oct 25;449(7165):1008-13
pubmed: 17960234
New Phytol. 2005 Feb;165(2):373-89
pubmed: 15720650
Science. 2007 Nov 2;318(5851):801-6
pubmed: 17975066
Elife. 2018 May 01;7:
pubmed: 29714687
Elife. 2020 Jul 29;9:
pubmed: 32723478
Nat Commun. 2020 Mar 13;11(1):1366
pubmed: 32170064
Elife. 2018 Feb 27;7:
pubmed: 29482719
Proc Natl Acad Sci U S A. 2016 Jul 26;113(30):E4294-303
pubmed: 27436908
Curr Biol. 2020 Nov 16;30(22):4467-4475.e4
pubmed: 32946753
Plant Cell. 1996 Dec;8(12):2155-68
pubmed: 8989876
Plant Physiol. 2000 Dec;124(4):1570-81
pubmed: 11115875
Bioinformatics. 2005 Jun;21 Suppl 1:i232-40
pubmed: 15961462
Science. 2003 Dec 12;302(5652):1956-60
pubmed: 14671301
Nat Commun. 2019 Feb 13;10(1):726
pubmed: 30760714
Science. 2008 Oct 24;322(5901):594-7
pubmed: 18948541
BMC Syst Biol. 2010 Jul 21;4:98
pubmed: 20663170
Cell Mol Life Sci. 2016 Nov;73(22):4213-4229
pubmed: 27286799
New Phytol. 2002 Mar;153(3):399-404
pubmed: 33863214
Development. 2007 Feb;134(4):681-90
pubmed: 17215297
Nat Rev Genet. 2009 Oct;10(10):669-80
pubmed: 19736561
Plant Cell. 2008 Jun;20(6):1494-503
pubmed: 18523061
Plant Cell Physiol. 2012 Jul;53(7):1283-94
pubmed: 22619471
Proc Natl Acad Sci U S A. 2020 Jul 28;117(30):18110-18118
pubmed: 32669427
Nat Protoc. 2017 Aug;12(8):1659-1672
pubmed: 28726847
Development. 1996 Jan;122(1):87-96
pubmed: 8565856
Proc Natl Acad Sci U S A. 2014 Jun 10;111(23):8685-90
pubmed: 24912195
Nat Rev Mol Cell Biol. 2001 Jan;2(1):33-9
pubmed: 11413463
Proc Natl Acad Sci U S A. 2011 Apr 12;108(15):6294-9
pubmed: 21383128
Curr Biol. 2011 Jun 7;21(11):917-26
pubmed: 21620702
Science. 2006 Jan 6;311(5757):94-8
pubmed: 16400151
Nat Chem Biol. 2012 Apr 01;8(5):477-85
pubmed: 22466420
Dev Cell. 2015 Jul 27;34(2):242-51
pubmed: 26166301
Cell. 1999 Nov 24;99(5):463-72
pubmed: 10589675
Plant J. 2018 Mar;93(6):963-976
pubmed: 29383853
Curr Biol. 2019 Aug 5;29(15):2443-2454.e5
pubmed: 31327713
Nat Protoc. 2017 Jan;12(1):44-73
pubmed: 27929523
Plant Reprod. 2019 Mar;32(1):113-121
pubmed: 30430248
Curr Biol. 2018 Oct 8;28(19):3031-3043.e2
pubmed: 30245102
Development. 2014 Dec;141(24):4831-40
pubmed: 25411212
Nature. 2008 Jun 19;453(7198):1094-7
pubmed: 18463635
Nucleic Acids Res. 2015 Jan;43(Database issue):D982-9
pubmed: 25398903
Mol Syst Biol. 2013;9:654
pubmed: 23549482
Genome Biol. 2009;10(12):249
pubmed: 20053306
EMBO J. 1999 Apr 15;18(8):2066-73
pubmed: 10205161
Curr Opin Plant Biol. 2003 Feb;6(1):7-12
pubmed: 12495745
Proc Natl Acad Sci U S A. 2011 Feb 22;108(8):3424-9
pubmed: 21300866
Development. 2013 Feb;140(4):765-9
pubmed: 23362345
Plant Cell. 2004 Feb;16(2):533-43
pubmed: 14742873
Philos Trans R Soc Lond B Biol Sci. 1998 Sep 29;353(1374):1511-5
pubmed: 9800211
Curr Biol. 2016 Feb 22;26(4):439-49
pubmed: 26832441
Nat Commun. 2019 May 29;10(1):2360
pubmed: 31142740
J Exp Bot. 2015 Aug;66(16):4971-82
pubmed: 25911743
Curr Biol. 2011 Jun 7;21(11):927-32
pubmed: 21620705
Plant J. 2000 Nov;24(4):543-50
pubmed: 11115135
Annu Rev Plant Biol. 2016 Apr 29;67:539-74
pubmed: 26905654
Curr Opin Plant Biol. 2012 Feb;15(1):103-10
pubmed: 22000039
Nature. 2010 Jul 1;466(7302):128-32
pubmed: 20596025
PLoS Biol. 2010 Oct 19;8(10):e1000516
pubmed: 20976043
EMBO J. 1998 Mar 2;17(5):1405-11
pubmed: 9482737
Cell. 2012 Aug 31;150(5):1002-15
pubmed: 22921914
Front Plant Sci. 2014 Dec 23;5:744
pubmed: 25566309
Nucleic Acids Res. 2018 Jul 2;46(W1):W49-W54
pubmed: 29718424
Proc Natl Acad Sci U S A. 2013 Jan 29;110(5):E435-44
pubmed: 23319655
Development. 2015 Feb 15;142(4):702-11
pubmed: 25617434
BMC Biol. 2018 Feb 07;16(1):20
pubmed: 29415713
Science. 2010 Sep 10;329(5997):1306-11
pubmed: 20829477
Development. 2020 Apr 20;147(8):
pubmed: 32198154
Science. 2015 Oct 23;350(6259):438-41
pubmed: 26494758
Cell. 2004 Oct 1;119(1):109-20
pubmed: 15454085
Cell. 2008 Apr 4;133(1):177-91
pubmed: 18394997
Plant Physiol. 2001 Jan;125(1):112-4
pubmed: 11154310
Proc Natl Acad Sci U S A. 2019 Feb 5;116(6):2338-2343
pubmed: 30651313
Curr Biol. 2014 May 19;24(10):R475-83
pubmed: 24845680
BMC Biol. 2017 Jul 11;15(1):59
pubmed: 28697754
Nat Biotechnol. 2020 Jun;38(6):708-714
pubmed: 32518404
Proc Natl Acad Sci U S A. 2014 Jan 14;111(2):857-62
pubmed: 24381155
Elife. 2015 May 06;4:05864
pubmed: 25946108
Development. 2004 Feb;131(3):657-68
pubmed: 14711878
Dev Cell. 2013 Feb 25;24(4):426-37
pubmed: 23415953
Nature. 2003 Nov 13;426(6963):147-53
pubmed: 14614497
BMC Biol. 2015 Sep 10;13:74
pubmed: 26358077
J Exp Bot. 2013 Nov;64(16):5021-32
pubmed: 24023250
Curr Opin Plant Biol. 2016 Feb;29:115-20
pubmed: 26799133
Dev Cell. 2014 Apr 14;29(1):75-87
pubmed: 24684831
Plant Cell. 2005 Dec;17(12):3282-300
pubmed: 16284307
Proc Natl Acad Sci U S A. 2016 Dec 6;113(49):14157-14162
pubmed: 27911812
Proc Natl Acad Sci U S A. 2009 Nov 3;106(44):18843-8
pubmed: 19843695
Curr Opin Plant Biol. 2006 Dec;9(6):571-8
pubmed: 17010658
Proc Natl Acad Sci U S A. 2010 May 4;107(18):8063-70
pubmed: 20385809
PLoS Biol. 2006 May;4(5):e143
pubmed: 16640459
EMBO J. 2001 Jul 16;20(14):3609-16
pubmed: 11447101
Science. 2011 Sep 9;333(6048):1436-40
pubmed: 21903812
Science. 1998 Dec 18;282(5397):2226-30
pubmed: 9856939
Proc Natl Acad Sci U S A. 2017 Mar 21;114(12):E2533-E2539
pubmed: 28265057
Science. 1997 Jun 20;276(5320):1865-8
pubmed: 9188533
Development. 2015 Feb 1;142(3):420-30
pubmed: 25605778
Plant Cell. 2014 Mar;26(3):862-75
pubmed: 24632533
Genome Biol. 2016 Apr 28;17:77
pubmed: 27121950
PLoS Comput Biol. 2019 Feb 11;15(2):e1006771
pubmed: 30742612
Development. 2009 Aug;136(16):2675-88
pubmed: 19633168
Biochem Soc Trans. 2014 Apr;42(2):352-7
pubmed: 24646243
Curr Biol. 2010 Oct 12;20(19):1697-706
pubmed: 20888232
Dev Cell. 2012 Jan 17;22(1):211-22
pubmed: 22264733
Dev Cell. 2021 Feb 22;56(4):540-556.e8
pubmed: 33621494
Science. 2006 May 12;312(5775):914-8
pubmed: 16601150
Nat Methods. 2017 Apr;14(4):395-398
pubmed: 28192419
Science. 2014 Jan 10;343(6167):178-83
pubmed: 24408432
Nat Methods. 2015 Mar;12(3):207-10, 2 p following 210
pubmed: 25643149
Plant Cell. 2006 Nov;18(11):3171-81
pubmed: 17114355
Science. 2014 Aug 8;345(6197):1255215
pubmed: 25104393

Auteurs

Yosapol Harnvanichvech (Y)

Physical Chemistry and Soft Matter, Wageningen University, Wageningen, The Netherlands.
Laboratory of Biochemistry, Wageningen University, Wageningen, The Netherlands.

Vera Gorelova (V)

Laboratory of Biochemistry, Wageningen University, Wageningen, The Netherlands.

Joris Sprakel (J)

Physical Chemistry and Soft Matter, Wageningen University, Wageningen, The Netherlands.

Dolf Weijers (D)

Laboratory of Biochemistry, Wageningen University, Wageningen, The Netherlands.

Classifications MeSH