Overlap of Genetic Loci for Central Serous Chorioretinopathy With Age-Related Macular Degeneration.


Journal

JAMA ophthalmology
ISSN: 2168-6173
Titre abrégé: JAMA Ophthalmol
Pays: United States
ID NLM: 101589539

Informations de publication

Date de publication:
01 05 2023
Historique:
pmc-release: 20 04 2024
medline: 22 5 2023
pubmed: 20 4 2023
entrez: 20 04 2023
Statut: ppublish

Résumé

Central serous chorioretinopathy (CSC) is a serous maculopathy of unknown etiology. Two of 3 previously reported CSC genetic risk loci are also associated with AMD. Improved understanding of CSC genetics may broaden our understanding of this genetic overlap and unveil mechanisms in both diseases. To identify novel genetic risk factors for CSC and compare genetic risk factors for CSC and AMD. Using International Classification of Diseases, Ninth (ICD-9) and Tenth (ICD-10) Revision code-based inclusion and exclusion criteria, patients with CSC and controls were identified in both the FinnGen study and the Estonian Biobank (EstBB). Also included in a meta-analysis were previously reported patients with chronic CSC and controls. Data were analyzed from March 1 to September 31, 2022. Genome-wide association studies (GWASs) were performed in the biobank-based cohorts followed by a meta-analysis of all cohorts. The expression of genes prioritized by the polygenic priority score and nearest-gene methods were assessed in cultured choroidal endothelial cells and public ocular single-cell RNA sequencing data sets. The predictive utility of polygenic scores (PGSs) for CSC and AMD were evaluated in the FinnGen study. A total of 1176 patients with CSC and 526 787 controls (312 162 female [59.3%]) were included in this analysis: 552 patients with CSC and 343 461 controls were identified in the FinnGen study, 103 patients with CSC and 178 573 controls were identified in the EstBB, and 521 patients with chronic CSC and 3577 controls were included in a meta-analysis. Two previously reported CSC risk loci were replicated (near CFH and GATA5) and 3 novel loci were identified (near CD34/46, NOTCH4, and PREX1). The CFH and NOTCH4 loci were associated with AMD but in the opposite direction. Prioritized genes showed increased expression in cultured choroidal endothelial cells compared with other genes in the loci (median [IQR] of log 2 [counts per million], 7.3 [0.6] vs 4.7 [3.7]; P = .004) and were differentially expressed in choroidal vascular endothelial cells in single-cell RNA sequencing data (mean [SD] fold change, 2.05 [0.38] compared with other cell types; P < 7.1 × 10-20). A PGS for AMD was predictive of reduced CSC risk (odds ratio, 0.76; 95% CI, 0.70-0.83 per +1 SD in AMD-PGS; P = 7.4 × 10-10). This association may have been mediated by loci containing complement genes. In this 3-cohort genetic association study, 5 genetic risk loci for CSC were identified, highlighting a likely role for genes involved in choroidal vascular function and complement regulation. Results suggest that polygenic AMD risk was associated with reduced risk of CSC and that this genetic overlap was largely due to loci containing complement genes.

Identifiants

pubmed: 37079300
pii: 2803847
doi: 10.1001/jamaophthalmol.2023.0706
pmc: PMC10119776
doi:

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

449-457

Subventions

Organisme : NEI NIH HHS
ID : K12 EY016335
Pays : United States
Organisme : NHLBI NIH HHS
ID : R01 HL157635
Pays : United States
Organisme : NHLBI NIH HHS
ID : R01 HL139731
Pays : United States

Commentaires et corrections

Type : CommentIn
Type : ErratumIn

Auteurs

Joel T Rämö (JT)

Institute for Molecular Medicine Finland (FIMM), Helsinki Institute of Life Science (HiLIFE), University of Helsinki, Helsinki, Finland.
Massachusetts Eye and Ear, Boston.
Cardiovascular Disease Initiative, Broad Institute of MIT and Harvard, Cambridge, Massachusetts.
Cardiovascular Research Center, Massachusetts General Hospital, Boston.

Erik Abner (E)

Department of Ophthalmology, Leiden University Medical Center, Leiden, the Netherlands.

Elon H C van Dijk (EHC)

Estonian Genome Center, University of Tartu, Tartu, Estonia.

Xin Wang (X)

Cardiovascular Disease Initiative, Broad Institute of MIT and Harvard, Cambridge, Massachusetts.

Joost Brinks (J)

Department of Ophthalmology, Leiden University Medical Center, Leiden, the Netherlands.

Tiit Nikopensius (T)

Estonian Genome Center, University of Tartu, Tartu, Estonia.

Margit Nõukas (M)

Estonian Genome Center, University of Tartu, Tartu, Estonia.
Institute of Molecular and Cell Biology, University of Tartu, Tartu, Estonia.

Heidi Marjonen (H)

Finnish Institute for Health and Welfare, Helsinki, Finland.

Kaisa Silander (K)

Finnish Institute for Health and Welfare, Helsinki, Finland.

Sakari Jukarainen (S)

Institute for Molecular Medicine Finland (FIMM), Helsinki Institute of Life Science (HiLIFE), University of Helsinki, Helsinki, Finland.

Tuomo Kiiskinen (T)

Institute for Molecular Medicine Finland (FIMM), Helsinki Institute of Life Science (HiLIFE), University of Helsinki, Helsinki, Finland.

Seung Hoan Choi (SH)

Cardiovascular Disease Initiative, Broad Institute of MIT and Harvard, Cambridge, Massachusetts.
Department of Biostatistics, Boston University, Boston, Massachusetts.

Risto Kajanne (R)

Institute for Molecular Medicine Finland (FIMM), Helsinki Institute of Life Science (HiLIFE), University of Helsinki, Helsinki, Finland.

Juha Mehtonen (J)

Institute for Molecular Medicine Finland (FIMM), Helsinki Institute of Life Science (HiLIFE), University of Helsinki, Helsinki, Finland.

Priit Palta (P)

Institute for Molecular Medicine Finland (FIMM), Helsinki Institute of Life Science (HiLIFE), University of Helsinki, Helsinki, Finland.
Department of Ophthalmology, Leiden University Medical Center, Leiden, the Netherlands.

Steven A Lubitz (SA)

Cardiovascular Disease Initiative, Broad Institute of MIT and Harvard, Cambridge, Massachusetts.
Cardiovascular Research Center, Massachusetts General Hospital, Harvard Medical School, Boston.

Kai Kaarniranta (K)

Department of Ophthalmology, University of Eastern Finland and Kuopio University Hospital, Kuopio, Finland.

Lucia Sobrin (L)

Harvard Medical School Department of Ophthalmology, Massachusetts Eye and Ear, Boston.

Mitja Kurki (M)

Institute for Molecular Medicine Finland (FIMM), Helsinki Institute of Life Science (HiLIFE), University of Helsinki, Helsinki, Finland.
Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts.
Psychiatric and Neurodevelopmental Genetics Unit, Massachusetts General Hospital and Harvard Medical School, Boston.

Suzanne Yzer (S)

Department of Ophthalmology, Radboud University Medical Center, Nijmegen, the Netherlands.
Donders Institute for Brain, Cognition and Behaviour, Radboud University Medical Center, Nijmegen, the Netherlands.

Patrick T Ellinor (PT)

Cardiovascular Disease Initiative, Broad Institute of MIT and Harvard, Cambridge, Massachusetts.
Cardiovascular Research Center, Massachusetts General Hospital, Harvard Medical School, Boston.

Tõnu Esko (T)

Department of Ophthalmology, Leiden University Medical Center, Leiden, the Netherlands.
Institute of Molecular and Cell Biology, University of Tartu, Tartu, Estonia.

Mark J Daly (MJ)

Institute for Molecular Medicine Finland (FIMM), Helsinki Institute of Life Science (HiLIFE), University of Helsinki, Helsinki, Finland.
Analytic and Translational Genetics Unit, Massachusetts General Hospital and Harvard Medical School, Boston.
Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, Massachusetts.

Anneke I den Hollander (AI)

Department of Ophthalmology, Radboud University Medical Center, Nijmegen, the Netherlands.
Genomics Research Center, AbbVie, Cambridge, Massachusetts.

Aarno Palotie (A)

Institute for Molecular Medicine Finland (FIMM), Helsinki Institute of Life Science (HiLIFE), University of Helsinki, Helsinki, Finland.
Psychiatric and Neurodevelopmental Genetics Unit, Massachusetts General Hospital and Harvard Medical School, Boston.
Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, Massachusetts.
Department of Neurology, Massachusetts General Hospital, Boston.
Analytic and Translational Genetics Unit, Massachusetts General Hospital and Harvard Medical School, Boston.

Joni A Turunen (JA)

Folkhälsan Research Center, Biomedicum, Helsinki, Finland.
Department of Ophthalmology, University of Helsinki, Helsinki, Finland.

Camiel J F Boon (CJF)

Estonian Genome Center, University of Tartu, Tartu, Estonia.
Department of Ophthalmology, Amsterdam University Medical Centers, University of Amsterdam, Amsterdam, the Netherlands.

Elizabeth J Rossin (EJ)

Harvard Medical School Department of Ophthalmology, Massachusetts Eye and Ear, Boston.
Broad Institute of MIT and Harvard, Cambridge, Massachusetts.

Articles similaires

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male

Classifications MeSH