mRNA markers associated with malignant pleural effusion.


Journal

Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288

Informations de publication

Date de publication:
24 04 2023
Historique:
received: 15 09 2022
accepted: 04 04 2023
medline: 26 4 2023
pubmed: 25 4 2023
entrez: 24 04 2023
Statut: epublish

Résumé

Malignant pleural effusions (MPE) commonly result from malignant tumors and represent advanced-stage cancers. Thus, in clinical practice, early recognition of MPE is valuable. However, the current diagnosis of MPE is based on pleural fluid cytology or histologic analysis of pleural biopsies with a low diagnostic rate. This research aimed to assess the diagnostic ability of eight previously identified Non-Small Cell Lung Cancer (NSCLC)-associated genes for MPE. In the study, eighty-two individuals with pleural effusion were recruited. There were thirty-three patients with MPE and forty-nine patients with benign transudate. mRNA was isolated from the pleural effusion and amplified by Quantitative real-time PCR. The logistic models were further applied to evaluate the diagnostic performance of those genes. Four significant MPE-associated genes were discovered in our study, including Dual-specificity phosphatase 6 (DUSP6), MDM2 proto-oncogene (MDM2), Ring finger protein 4 (RNF4), and WEE1 G2 Checkpoint Kinase (WEE1). Pleural effusion with higher expression levels of MDM2 and WEE1 and lower expression levels of RNF4 and DUSP6 had a higher possibility of being MPE. The four-gene model had an excellent performance distinguishing MPE and benign pleural effusion, especially for pathologically negative effusions. Therefore, the gene combination is a suitable candidate for MPE screening in patients with pleural effusion. We also identified three survival-associated genes, WEE1, Neurofibromin 1 (NF1), and DNA polymerase delta interacting protein 2 (POLDIP2), which could predict the overall survival of patients with MPE.

Identifiants

pubmed: 37095178
doi: 10.1038/s41598-023-32872-2
pii: 10.1038/s41598-023-32872-2
pmc: PMC10126123
doi:

Substances chimiques

Biomarkers, Tumor 0
POLDIP2 protein, human 0
Nuclear Proteins 0
RNF4 protein, human 0
Transcription Factors 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

6677

Informations de copyright

© 2023. The Author(s).

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Auteurs

Shih-Chang Hsu (SC)

Department of Emergency, School of Medicine, College of Medicine, Taipei Medical University, Taipei, Taiwan, ROC.
Emergency Department, Wan Fang Hospital, Taipei Medical University, Taipei, Taiwan, ROC.

Shan-Yueh Chang (SY)

Division of Pulmonary and Critical Medicine, Department of Internal Medicine, Tri-Service General Hospital, National Defense Medical Center, Taipei, Taiwan, ROC.

Yi-Ting Hwang (YT)

Department of Statistics, National Taipei University, Taipei, Taiwan, ROC.

Harn-Jing Terng (HJ)

Advpharma, Inc, Taipei, Taiwan, ROC.

Chen-Liang Tsai (CL)

Division of Pulmonary and Critical Medicine, Department of Internal Medicine, Tri-Service General Hospital, National Defense Medical Center, Taipei, Taiwan, ROC.

Chih-Hao Shen (CH)

Division of Pulmonary and Critical Medicine, Department of Internal Medicine, Tri-Service General Hospital, National Defense Medical Center, Taipei, Taiwan, ROC.

Shau Ku Huang (SK)

National Institute of Environmental Health Sciences, National Health Research Institutes, Zhunan, Taiwan, ROC.
Johns Hopkins Asthma and Allergy Center, Johns Hopkins University School of Medicine, Baltimore, USA.

Chih-Feng Chian (CF)

Division of Pulmonary and Critical Medicine, Department of Internal Medicine, Tri-Service General Hospital, National Defense Medical Center, Taipei, Taiwan, ROC. sonice3982@gmail.com.

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Classifications MeSH