Predicting seizure outcome after epilepsy surgery: Do we need more complex models, larger samples, or better data?


Journal

Epilepsia
ISSN: 1528-1167
Titre abrégé: Epilepsia
Pays: United States
ID NLM: 2983306R

Informations de publication

Date de publication:
08 2023
Historique:
revised: 30 04 2023
received: 13 02 2023
accepted: 01 05 2023
medline: 9 8 2023
pubmed: 2 5 2023
entrez: 2 5 2023
Statut: ppublish

Résumé

The accurate prediction of seizure freedom after epilepsy surgery remains challenging. We investigated if (1) training more complex models, (2) recruiting larger sample sizes, or (3) using data-driven selection of clinical predictors would improve our ability to predict postoperative seizure outcome using clinical features. We also conducted the first substantial external validation of a machine learning model trained to predict postoperative seizure outcome. We performed a retrospective cohort study of 797 children who had undergone resective or disconnective epilepsy surgery at a tertiary center. We extracted patient information from medical records and trained three models-a logistic regression, a multilayer perceptron, and an XGBoost model-to predict 1-year postoperative seizure outcome on our data set. We evaluated the performance of a recently published XGBoost model on the same patients. We further investigated the impact of sample size on model performance, using learning curve analysis to estimate performance at samples up to N = 2000. Finally, we examined the impact of predictor selection on model performance. Our logistic regression achieved an accuracy of 72% (95% confidence interval [CI] = 68%-75%, area under the curve [AUC] = .72), whereas our multilayer perceptron and XGBoost both achieved accuracies of 71% (95% CI We show that neither the deployment of complex machine learning models nor the assembly of thousands of patients alone is likely to generate significant improvements in our ability to predict postoperative seizure freedom. We instead propose that improved feature selection alongside collaboration, data standardization, and model sharing is required to advance the field.

Identifiants

pubmed: 37129087
doi: 10.1111/epi.17637
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

2014-2026

Subventions

Organisme : Wellcome Trust
ID : 215901/Z/19/Z
Pays : United Kingdom
Organisme : Department of Health
Pays : United Kingdom

Commentaires et corrections

Type : CommentIn

Informations de copyright

© 2023 The Authors. Epilepsia published by Wiley Periodicals LLC on behalf of International League Against Epilepsy.

Références

Epilepsy Behav. 2014 Mar;32:102-7
pubmed: 24531133
Neuroimage Clin. 2014 Nov 27;7:122-31
pubmed: 25610774
Brain Commun. 2021 Jul 16;3(3):fcab164
pubmed: 34396113
Ann Neurol. 2020 Nov;88(5):970-983
pubmed: 32827235
J Neurosurg. 1999 Jun;90(6):998-1004
pubmed: 10350243
J Neurol Neurosurg Psychiatry. 2022 Jun;93(6):599-608
pubmed: 35347079
Lancet Neurol. 2020 Sep;19(9):748-757
pubmed: 32822635
Epilepsia. 2022 Aug;63(8):1956-1969
pubmed: 35661152
Epilepsia. 1998 Jan;39(1):61-6
pubmed: 9578014
BMC Med Res Methodol. 2014 Dec 22;14:137
pubmed: 25532820
BMC Med Inform Decis Mak. 2012 Feb 15;12:8
pubmed: 22336388
J Neurol Neurosurg Psychiatry. 2022 May;93(5):499-508
pubmed: 35246493
Neuroimage. 2015 Sep;118:219-30
pubmed: 26054876
Neurology. 2017 Jun 13;88(24):2285-2293
pubmed: 28515267
Epilepsia. 2021 Sep;62(9):2113-2122
pubmed: 34275140
Epilepsia. 2017 May;58(5):792-800
pubmed: 28378422
Epilepsia. 2015 Oct;56(10):1515-23
pubmed: 26336950
Neuroimage Clin. 2013 Jun 23;2:903-11
pubmed: 24179841
Lancet Neurol. 2015 Mar;14(3):283-90
pubmed: 25638640
Ann Neurol. 2015 Mar;77(3):436-46
pubmed: 25546153
J Clin Epidemiol. 2019 Jun;110:12-22
pubmed: 30763612
Epilepsy Res. 2005 Aug-Sep;66(1-3):195-8
pubmed: 16118044
Brain. 2022 Nov 21;145(11):3859-3871
pubmed: 35953082
Epilepsia. 2023 Aug;64(8):2014-2026
pubmed: 37129087
Neurology. 2016 Feb 16;86(7):643-50
pubmed: 26764030
Commun Biol. 2022 Apr 28;5(1):394
pubmed: 35484213
Am J Public Health. 1996 May;86(5):726-8
pubmed: 8629727
Epilepsia. 2011 Jan;52(1):158-74
pubmed: 21219302
Epilepsia. 2008 Jan;49(1):146-55
pubmed: 18042232
JAMA Neurol. 2020 Jan 1;77(1):49-57
pubmed: 31633742
Epilepsia. 2022 Jan;63(1):61-74
pubmed: 34845719
Seizure. 2020 Feb 1;76:79-83
pubmed: 32035367
Lancet Child Adolesc Health. 2022 Jul;6(7):484-494
pubmed: 35568054
Epilepsia. 2015 Mar;56(3):359-65
pubmed: 25530458
NPJ Digit Med. 2022 Apr 12;5(1):48
pubmed: 35413988
Epilepsy Behav. 2021 Mar;116:107714
pubmed: 33485794
Brain. 2017 Feb;140(2):319-332
pubmed: 28011454
Neurology. 2021 Feb 2;96(5):e758-e771
pubmed: 33361262
Neuroimage Clin. 2018 Jan 31;18:202-214
pubmed: 29876245
Epilepsia. 2017 Apr;58(4):512-521
pubmed: 28276062
Neurology. 2020 Feb 18;94(7):311-321
pubmed: 31996452
PLoS One. 2013 Oct 30;8(10):e77916
pubmed: 24205027
Comput Biol Med. 2015 Sep;64:67-78
pubmed: 26149291
BMJ. 2020 Mar 18;368:m441
pubmed: 32188600
Epilepsia. 2013 Jul;54(7):1315-29
pubmed: 23692496
Epilepsy Behav. 2019 Jun;95:124-130
pubmed: 31035104
Epilepsia. 2021 Jun;62(6):1416-1428
pubmed: 33949696
J Big Data. 2021;8(1):140
pubmed: 34722113
Neuroimage Clin. 2017 Sep 22;16:634-642
pubmed: 28971013
Seizure. 2015 Aug;30:132-5
pubmed: 26216698
Epilepsia. 2022 Jun;63(6):1349-1397
pubmed: 35503712
PLoS One. 2013 Apr 30;8(4):e62819
pubmed: 23646148
Epilepsia. 2022 May;63(5):1081-1092
pubmed: 35266138
Brain. 2022 Nov 21;145(11):3725-3726
pubmed: 36412514
Epilepsia. 2017 Mar;58(3):402-411
pubmed: 28166392
Epilepsia. 2018 Sep;59(9):1643-1654
pubmed: 30098002

Auteurs

Maria H Eriksson (MH)

Developmental Neurosciences Research & Teaching Department, UCL Great Ormond Street Institute of Child Health, London, UK.
Department of Neuropsychology, Great Ormond Street Hospital, London, UK.
Department of Neurology, Great Ormond Street Hospital, London, UK.
The Alan Turing Institute, London, UK.

Mathilde Ripart (M)

Developmental Neurosciences Research & Teaching Department, UCL Great Ormond Street Institute of Child Health, London, UK.

Rory J Piper (RJ)

Developmental Neurosciences Research & Teaching Department, UCL Great Ormond Street Institute of Child Health, London, UK.
Department of Neurosurgery, Great Ormond Street Hospital, London, UK.

Friederike Moeller (F)

Department of Neurophysiology, Great Ormond Street Hospital, London, UK.

Krishna B Das (KB)

Department of Neurology, Great Ormond Street Hospital, London, UK.
Department of Neurophysiology, Great Ormond Street Hospital, London, UK.

Christin Eltze (C)

Department of Neurophysiology, Great Ormond Street Hospital, London, UK.

Gerald Cooray (G)

Department of Neurophysiology, Great Ormond Street Hospital, London, UK.
Clinical Neuroscience, Karolinska Institute, Solna, Sweden.

John Booth (J)

Digital Research Environment, Great Ormond Street Hospital, London, UK.

Kirstie J Whitaker (KJ)

The Alan Turing Institute, London, UK.

Aswin Chari (A)

Developmental Neurosciences Research & Teaching Department, UCL Great Ormond Street Institute of Child Health, London, UK.
Department of Neurosurgery, Great Ormond Street Hospital, London, UK.

Patricia Martin Sanfilippo (P)

Developmental Neurosciences Research & Teaching Department, UCL Great Ormond Street Institute of Child Health, London, UK.
Department of Neuropsychology, Great Ormond Street Hospital, London, UK.

Ana Perez Caballero (A)

North Thames Genomic Laboratory Hub, Great Ormond Street Hospital, London, UK.

Lara Menzies (L)

Department of Clinical Genetics, Great Ormond Street Hospital, London, UK.

Amy McTague (A)

Developmental Neurosciences Research & Teaching Department, UCL Great Ormond Street Institute of Child Health, London, UK.
Department of Neurology, Great Ormond Street Hospital, London, UK.

Martin M Tisdall (MM)

Developmental Neurosciences Research & Teaching Department, UCL Great Ormond Street Institute of Child Health, London, UK.
Department of Neurosurgery, Great Ormond Street Hospital, London, UK.

J Helen Cross (JH)

Developmental Neurosciences Research & Teaching Department, UCL Great Ormond Street Institute of Child Health, London, UK.
Department of Neurology, Great Ormond Street Hospital, London, UK.
Department of Neurosurgery, Great Ormond Street Hospital, London, UK.
Young Epilepsy, Lingfield, UK.

Torsten Baldeweg (T)

Developmental Neurosciences Research & Teaching Department, UCL Great Ormond Street Institute of Child Health, London, UK.
Department of Neuropsychology, Great Ormond Street Hospital, London, UK.

Sophie Adler (S)

Developmental Neurosciences Research & Teaching Department, UCL Great Ormond Street Institute of Child Health, London, UK.

Konrad Wagstyl (K)

Imaging Neuroscience, UCL Queen Square Institute of Neurology, London, UK.

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