The Nucleocapsid Proteins of SARS-CoV-2 and Its Close Relative Bat Coronavirus RaTG13 Are Capable of Inhibiting PKR- and RNase L-Mediated Antiviral Pathways.


Journal

Microbiology spectrum
ISSN: 2165-0497
Titre abrégé: Microbiol Spectr
Pays: United States
ID NLM: 101634614

Informations de publication

Date de publication:
15 06 2023
Historique:
medline: 19 6 2023
pubmed: 8 5 2023
entrez: 8 5 2023
Statut: ppublish

Résumé

Coronaviruses (CoVs), including severe acute respiratory syndrome CoV (SARS-CoV), Middle East respiratory syndrome CoV (MERS-CoV), and SARS-CoV-2, produce double-stranded RNA (dsRNA) that activates antiviral pathways such as PKR and OAS/RNase L. To successfully replicate in hosts, viruses must evade such antiviral pathways. Currently, the mechanism of how SARS-CoV-2 antagonizes dsRNA-activated antiviral pathways is unknown. In this study, we demonstrate that the SARS-CoV-2 nucleocapsid (N) protein, the most abundant viral structural protein, is capable of binding to dsRNA and phosphorylated PKR, inhibiting both the PKR and OAS/RNase L pathways. The N protein of the bat coronavirus (bat-CoV) RaTG13, the closest relative of SARS-CoV-2, has a similar ability to inhibit the human PKR and RNase L antiviral pathways. Via mutagenic analysis, we found that the C-terminal domain (CTD) of the N protein is sufficient for binding dsRNA and inhibiting RNase L activity. Interestingly, while the CTD is also sufficient for binding phosphorylated PKR, the inhibition of PKR antiviral activity requires not only the CTD but also the central linker region (LKR). Thus, our findings demonstrate that the SARS-CoV-2 N protein is capable of antagonizing the two critical antiviral pathways activated by viral dsRNA and that its inhibition of PKR activities requires more than dsRNA binding mediated by the CTD.

Identifiants

pubmed: 37154717
doi: 10.1128/spectrum.00994-23
pmc: PMC10269842
doi:

Substances chimiques

2-5A-dependent ribonuclease EC 3.1.26.-
Antiviral Agents 0
Nucleocapsid Proteins 0
Viral Proteins 0
RNA, Double-Stranded 0

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

e0099423

Subventions

Organisme : NIAID NIH HHS
ID : R01 AI151638
Pays : United States

Déclaration de conflit d'intérêts

The authors declare no conflict of interest.

Références

Proc Natl Acad Sci U S A. 2022 May 24;119(21):e2123208119
pubmed: 35594398
Cell Discov. 2021 May 25;7(1):38
pubmed: 34035218
J Virol. 2007 Mar;81(6):2554-63
pubmed: 17182678
Virology. 2018 Apr;517:157-163
pubmed: 29307596
Nat Commun. 2021 Jun 14;12(1):3612
pubmed: 34127676
Cell Discov. 2021 Jan 21;7(1):5
pubmed: 33479219
FEBS Lett. 2021 Dec;595(23):2872-2896
pubmed: 34780058
J Virol. 2002 Apr;76(8):3697-708
pubmed: 11907209
MethodsX. 2020 May 15;7:100918
pubmed: 32509537
Vaccine. 1996 Oct;14(15):1451-8
pubmed: 8994321
J Virol. 2020 Jun 16;94(13):
pubmed: 32546606
Nature. 2020 Mar;579(7798):270-273
pubmed: 32015507
J Interferon Cytokine Res. 2011 Jan;31(1):49-57
pubmed: 21190483
Nat Commun. 2021 Jan 21;12(1):502
pubmed: 33479198
PLoS Pathog. 2020 Jul 29;16(7):e1008737
pubmed: 32726355
J Virol. 2015 May;89(10):5382-94
pubmed: 25740987
Arch Virol. 2022 Oct;167(10):1925-1930
pubmed: 35763067
Cell Host Microbe. 2012 Jun 14;11(6):607-16
pubmed: 22704621
Cell Res. 2020 Dec;30(12):1143-1145
pubmed: 32901111
Nat Cell Biol. 2021 Jul;23(7):718-732
pubmed: 34239064
Viruses. 2014 Aug 07;6(8):2991-3018
pubmed: 25105276
Microbiol Mol Biol Rev. 2006 Dec;70(4):1032-60
pubmed: 17158706
Sci Bull (Beijing). 2021 Jun 30;66(12):1194-1204
pubmed: 33495715
Biochem Pharmacol. 2021 Jan;183:114316
pubmed: 33152343
J Virol. 2016 Aug 12;90(17):7864-79
pubmed: 27334583
J Virol. 2018 Sep 26;92(20):
pubmed: 30068649
Virology. 2020 Feb;541:101-112
pubmed: 32056708
Antiviral Res. 2014 Mar;103:39-50
pubmed: 24418573
Mol Cell. 2020 Dec 17;80(6):1092-1103.e4
pubmed: 33248025
J Virol. 2015 Sep;89(18):9383-92
pubmed: 26136565
J Virol. 2022 May 11;96(9):e0038922
pubmed: 35412347
Cell. 2021 Sep 16;184(19):4848-4856
pubmed: 34480864
J Virol. 2009 Jul;83(13):6757-68
pubmed: 19369349
Nature. 2022 Apr;604(7905):330-336
pubmed: 35172323
J Virol. 2001 Aug;75(15):7018-29
pubmed: 11435582
Cell. 2021 Jun 24;184(13):3438-3451.e10
pubmed: 34139177
Virology. 2002 Jul 20;299(1):133-41
pubmed: 12167348
Nat Rev Microbiol. 2021 Mar;19(3):141-154
pubmed: 33024307
J Virol. 2011 Dec;85(23):12280-91
pubmed: 21917954
Nat Microbiol. 2020 Apr;5(4):536-544
pubmed: 32123347
NPJ Vaccines. 2022 Jan 21;7(1):7
pubmed: 35064109
Viruses. 2021 Feb 25;13(3):
pubmed: 33669141
Biochimie. 2007 Jun-Jul;89(6-7):799-811
pubmed: 17451862
Virology. 1994 Mar;199(2):491-6
pubmed: 7510087
PLoS Pathog. 2016 Oct 26;12(10):e1005982
pubmed: 27783669
Nucleic Acids Res. 1991 Jun 11;19(11):2993-3000
pubmed: 2057357
J Virol. 2011 Jan;85(1):550-67
pubmed: 20943971
Nat Commun. 2020 Nov 30;11(1):6121
pubmed: 33257686
Nucleic Acids Res. 2022 Aug 12;50(14):8168-8192
pubmed: 35871289
J Interferon Cytokine Res. 2014 Jun;34(6):447-54
pubmed: 24905201
mBio. 2019 Mar 26;10(2):
pubmed: 30914508
Annu Rev Microbiol. 2019 Sep 8;73:529-557
pubmed: 31226023
J Virol. 2022 Jun 22;96(12):e0041222
pubmed: 35652658
Proc Natl Acad Sci U S A. 2021 Apr 20;118(16):
pubmed: 33811184
Nat Commun. 2021 Apr 9;12(1):2114
pubmed: 33837182
Nat Commun. 2021 Mar 29;12(1):1936
pubmed: 33782395
J Virol. 2006 May;80(10):5059-64
pubmed: 16641297
PLoS Pathog. 2021 Feb 26;17(2):e1008690
pubmed: 33635931
J Biol Chem. 2022 Mar;298(3):101677
pubmed: 35131265
Nature. 2020 Mar;579(7798):265-269
pubmed: 32015508
Science. 2021 Aug 27;373(6558):968-970
pubmed: 34404734

Auteurs

Kyle LeBlanc (K)

Poxviruses and Vaccine Design, Division of Viral Diseases, Directorate of Science Reference and Surveillance, National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, Manitoba, Canada.

Jessie Lynch (J)

Poxviruses and Vaccine Design, Division of Viral Diseases, Directorate of Science Reference and Surveillance, National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, Manitoba, Canada.

Christine Layne (C)

Poxviruses and Vaccine Design, Division of Viral Diseases, Directorate of Science Reference and Surveillance, National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, Manitoba, Canada.

Robert Vendramelli (R)

Special Pathogens, Division of Health Security and Response, Directorate of Scientific Operations and Response, National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, Manitoba, Canada.

Angela Sloan (A)

Special Pathogens, Division of Health Security and Response, Directorate of Scientific Operations and Response, National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, Manitoba, Canada.

Nikesh Tailor (N)

Special Pathogens, Division of Health Security and Response, Directorate of Scientific Operations and Response, National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, Manitoba, Canada.

Yvon Deschambault (Y)

Special Pathogens, Division of Health Security and Response, Directorate of Scientific Operations and Response, National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, Manitoba, Canada.

Fushun Zhang (F)

Department of Microbiology and Immunology, The University of Texas Health Science Center, San Antonio, Texas, USA.

Darwyn Kobasa (D)

Special Pathogens, Division of Health Security and Response, Directorate of Scientific Operations and Response, National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, Manitoba, Canada.

David Safronetz (D)

Special Pathogens, Division of Health Security and Response, Directorate of Scientific Operations and Response, National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, Manitoba, Canada.

Yan Xiang (Y)

Department of Microbiology and Immunology, The University of Texas Health Science Center, San Antonio, Texas, USA.

Jingxin Cao (J)

Poxviruses and Vaccine Design, Division of Viral Diseases, Directorate of Science Reference and Surveillance, National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, Manitoba, Canada.

Articles similaires

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male

Classifications MeSH