Vibrational circular dichroism spectra of natural products by means of the nuclear velocity perturbation theory.

CP2K Chirality Chiroptical spectroscopy NVPT Natural products VCD

Journal

Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy
ISSN: 1873-3557
Titre abrégé: Spectrochim Acta A Mol Biomol Spectrosc
Pays: England
ID NLM: 9602533

Informations de publication

Date de publication:
05 Oct 2023
Historique:
received: 22 12 2022
revised: 24 03 2023
accepted: 18 04 2023
medline: 11 5 2023
pubmed: 11 5 2023
entrez: 10 5 2023
Statut: ppublish

Résumé

We present the application of the recently implemented nuclear velocity perturbation theory, using the combined Gaussian and plane waves approach in CP2K, to the vibrational circular dichroism (VCD) spectra of a set of natural products. Even though the calculations were carried out for isolated molecules in the gas-phase limit, neglecting inter-molecular interactions and anharmonic effects, the match between simulated and experimental spectra is reasonable. We also study the influence of different density functionals on the conformational search and the resulting VCD spectra via group coupling matrices (GCMs). The GCM analysis reveals that the VCD signal can in some cases arise from moieties which are close to each other and in other cases from moieties far from each other. Differences in spectra obtained using different exchange-correlation density functionals can be attributed to interaction terms between different moieties in the molecules changing their sign.

Identifiants

pubmed: 37163900
pii: S1386-1425(23)00454-7
doi: 10.1016/j.saa.2023.122769
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

122769

Informations de copyright

Copyright © 2023 The Author(s). Published by Elsevier B.V. All rights reserved.

Déclaration de conflit d'intérêts

Declaration of Competing Interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: Sandra Luber reports financial support was provided by University of Zurich.

Auteurs

Edward Ditler (E)

University of Zurich, Winterthurerstrasse 190, 8057, Zurich, Switzerland.

Chandan Kumar (C)

University of Zurich, Winterthurerstrasse 190, 8057, Zurich, Switzerland.

Sandra Luber (S)

University of Zurich, Winterthurerstrasse 190, 8057, Zurich, Switzerland. Electronic address: sandra.luber@chem.uzh.ch.

Classifications MeSH