Vibrational circular dichroism spectra of natural products by means of the nuclear velocity perturbation theory.
CP2K
Chirality
Chiroptical spectroscopy
NVPT
Natural products
VCD
Journal
Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy
ISSN: 1873-3557
Titre abrégé: Spectrochim Acta A Mol Biomol Spectrosc
Pays: England
ID NLM: 9602533
Informations de publication
Date de publication:
05 Oct 2023
05 Oct 2023
Historique:
received:
22
12
2022
revised:
24
03
2023
accepted:
18
04
2023
medline:
11
5
2023
pubmed:
11
5
2023
entrez:
10
5
2023
Statut:
ppublish
Résumé
We present the application of the recently implemented nuclear velocity perturbation theory, using the combined Gaussian and plane waves approach in CP2K, to the vibrational circular dichroism (VCD) spectra of a set of natural products. Even though the calculations were carried out for isolated molecules in the gas-phase limit, neglecting inter-molecular interactions and anharmonic effects, the match between simulated and experimental spectra is reasonable. We also study the influence of different density functionals on the conformational search and the resulting VCD spectra via group coupling matrices (GCMs). The GCM analysis reveals that the VCD signal can in some cases arise from moieties which are close to each other and in other cases from moieties far from each other. Differences in spectra obtained using different exchange-correlation density functionals can be attributed to interaction terms between different moieties in the molecules changing their sign.
Identifiants
pubmed: 37163900
pii: S1386-1425(23)00454-7
doi: 10.1016/j.saa.2023.122769
pii:
doi:
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
122769Informations de copyright
Copyright © 2023 The Author(s). Published by Elsevier B.V. All rights reserved.
Déclaration de conflit d'intérêts
Declaration of Competing Interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: Sandra Luber reports financial support was provided by University of Zurich.