The SWI/SNF chromatin-remodeling subunit DPF2 facilitates NRF2-dependent antiinflammatory and antioxidant gene expression.
Epigenetics
Hematology
Hematopoietic stem cells
Inflammation
Macrophages
Journal
The Journal of clinical investigation
ISSN: 1558-8238
Titre abrégé: J Clin Invest
Pays: United States
ID NLM: 7802877
Informations de publication
Date de publication:
03 07 2023
03 07 2023
Historique:
received:
12
01
2022
accepted:
16
05
2023
medline:
4
7
2023
pubmed:
18
5
2023
entrez:
18
5
2023
Statut:
epublish
Résumé
During emergency hematopoiesis, hematopoietic stem cells (HSCs) rapidly proliferate to produce myeloid and lymphoid effector cells, a response that is critical against infection or tissue injury. If unresolved, this process leads to sustained inflammation, which can cause life-threatening diseases and cancer. Here, we identify a role of double PHD fingers 2 (DPF2) in modulating inflammation. DPF2 is a defining subunit of the hematopoiesis-specific BAF (SWI/SNF) chromatin-remodeling complex, and it is mutated in multiple cancers and neurological disorders. We uncovered that hematopoiesis-specific Dpf2-KO mice developed leukopenia, severe anemia, and lethal systemic inflammation characterized by histiocytic and fibrotic tissue infiltration resembling a clinical hyperinflammatory state. Dpf2 loss impaired the polarization of macrophages responsible for tissue repair, induced the unrestrained activation of Th cells, and generated an emergency-like state of HSC hyperproliferation and myeloid cell-biased differentiation. Mechanistically, Dpf2 deficiency resulted in the loss of the BAF catalytic subunit BRG1 from nuclear factor erythroid 2-like 2-controlled (NRF2-controlled) enhancers, impairing the antioxidant and antiinflammatory transcriptional response needed to modulate inflammation. Finally, pharmacological reactivation of NRF2 suppressed the inflammation-mediated phenotypes and lethality of Dpf2Δ/Δ mice. Our work establishes an essential role of the DPF2-BAF complex in licensing NRF2-dependent gene expression in HSCs and immune effector cells to prevent chronic inflammation.
Identifiants
pubmed: 37200093
pii: 158419
doi: 10.1172/JCI158419
pmc: PMC10313367
doi:
pii:
Substances chimiques
Chromatin
0
Antioxidants
0
NF-E2-Related Factor 2
0
DPF2 protein, mouse
0
DNA-Binding Proteins
0
Transcription Factors
0
Types de publication
Journal Article
Research Support, N.I.H., Extramural
Research Support, U.S. Gov't, Non-P.H.S.
Langues
eng
Sous-ensembles de citation
IM
Subventions
Organisme : NCI NIH HHS
ID : P30 CA240139
Pays : United States
Références
Haematologica. 2020 Apr;105(4):951-960
pubmed: 31439678
Exp Hematol. 2021 Nov;103:15-23
pubmed: 34464661
Curr Protoc Mol Biol. 2015 Jan 05;109:21.29.1-21.29.9
pubmed: 25559105
Exp Hematol. 2017 Apr;48:58-71.e15
pubmed: 27931852
J Biol Chem. 1994 Nov 25;269(47):29515-9
pubmed: 7961935
Eur Rev Med Pharmacol Sci. 2012 Oct;16(10):1414-24
pubmed: 23104659
Proc Natl Acad Sci U S A. 2010 Jul 20;107(29):12747-54
pubmed: 20543139
Annu Rev Pathol. 2018 Jan 24;13:27-49
pubmed: 28934563
Pharmacol Rev. 2018 Apr;70(2):348-383
pubmed: 29507103
Curr Protoc Immunol. 2008 Nov;Chapter 14:14.1.1-14.1.14
pubmed: 19016445
J Clin Invest. 2006 Apr;116(4):984-95
pubmed: 16585964
Immunol Rev. 2009 Jul;230(1):160-71
pubmed: 19594635
Cell Cycle. 2016 Dec;15(23):3183-3190
pubmed: 27753528
Arthritis Rheumatol. 2020 Oct;72(10):1707-1720
pubmed: 32500632
Cell Stem Cell. 2018 Jun 01;22(6):879-892.e6
pubmed: 29804890
Front Immunol. 2019 Jun 11;10:1315
pubmed: 31244854
Nat Rev Drug Discov. 2019 Apr;18(4):295-317
pubmed: 30610225
Cell. 2018 Nov 15;175(5):1272-1288.e20
pubmed: 30343899
Mol Cell Biol. 2006 Nov;26(21):7942-52
pubmed: 16923960
Sci Rep. 2016 Feb 10;6:20686
pubmed: 26861911
Nat Cell Biol. 2018 Dec;20(12):1410-1420
pubmed: 30397315
Cancer Cell. 2018 Jul 9;34(1):21-43
pubmed: 29731393
JCI Insight. 2021 Oct 8;6(19):
pubmed: 34622806
Cell Rep. 2013 Dec 26;5(6):1625-38
pubmed: 24332853
Mol Cell. 2015 Apr 16;58(2):203-15
pubmed: 25818647
J Biol Chem. 2003 Jan 24;278(4):2396-402
pubmed: 12441344
J Biol Chem. 2010 Jul 16;285(29):21951-60
pubmed: 20460684
Nucleic Acids Res. 2012 May;40(10):4288-97
pubmed: 22287627
Trends Immunol. 2017 May;38(5):345-357
pubmed: 28216309
Trends Mol Med. 2020 Feb;26(2):185-200
pubmed: 31679988
Leukemia. 2022 Jan;36(1):23-32
pubmed: 34853440
J Biol Chem. 2012 Apr 6;287(15):11924-33
pubmed: 22334708
Proc Natl Acad Sci U S A. 2009 Oct 13;106(41):17413-8
pubmed: 19805084
Curr Protoc Immunol. 2014 Feb 04;104:22F.5.1-22F.5.28
pubmed: 24510620
Front Neurosci. 2020 Apr 21;14:267
pubmed: 32372896
Front Cell Dev Biol. 2021 Apr 06;9:624914
pubmed: 33889571
Curr Protoc Cytom. 2018 Jan 18;83:10.21.1-10.21.28
pubmed: 29345329
Nat Genet. 2017 Nov;49(11):1613-1623
pubmed: 28945250
Leukemia. 2019 Sep;33(9):2291-2305
pubmed: 30858552
Proc Natl Acad Sci U S A. 2005 Mar 22;102(12):4584-9
pubmed: 15767573
Cell. 2017 Sep 21;171(1):163-178.e19
pubmed: 28844694
Oncotarget. 2016 Apr 12;7(15):19134-46
pubmed: 26992241
Cell Rep. 2016 Dec 6;17(10):2584-2595
pubmed: 27926863
Cancer Res. 2002 Sep 15;62(18):5196-203
pubmed: 12234984
Am J Pathol. 2006 Jun;168(6):1960-74
pubmed: 16723711
Biochim Biophys Acta. 2008 May;1783(5):713-27
pubmed: 18241676
Blood. 2012 Dec 6;120(24):4720-32
pubmed: 23018638
J Immunol. 2004 Feb 1;172(3):1407-13
pubmed: 14734716
Blood. 2010 Sep 9;116(10):1678-84
pubmed: 20522713
Molecules. 2020 Nov 23;25(22):
pubmed: 33238435
Nucleic Acids Res. 2010 Sep;38(17):5718-34
pubmed: 20460467
Sci Adv. 2015 Jun 12;1(5):e1500447
pubmed: 26601204
Kidney Int. 2001 Oct;60(4):1343-53
pubmed: 11576348
J Clin Invest. 2014 Feb;124(2):730-41
pubmed: 24463449
Genes Cells. 2014 Mar;19(3):239-53
pubmed: 24580727
Am J Hum Genet. 2018 Mar 1;102(3):468-479
pubmed: 29429572
FASEB J. 2020 Sep;34(9):11997-12008
pubmed: 32738093
Biochim Biophys Acta Mol Basis Dis. 2017 Feb;1863(2):585-597
pubmed: 27825853
J Immunol. 2015 Apr 1;194(7):3054-64
pubmed: 25740943
Nat Commun. 2018 Aug 23;9(1):3377
pubmed: 30139998
Pediatrics. 2019 Jul;144(1):
pubmed: 31243159
Mol Cell Biol. 2017 Sep 12;37(19):
pubmed: 28674188
Nature. 2016 Sep 22;537(7621):508-514
pubmed: 27626380
Bioinformatics. 2010 Jan 1;26(1):139-40
pubmed: 19910308
Nat Genet. 2017 May;49(5):753-764
pubmed: 28369034
Nat Commun. 2016 May 23;7:11624
pubmed: 27211851
Cytometry A. 2013 May;83(5):483-94
pubmed: 23512433
J Pharm Sci. 2008 Oct;97(10):4528-45
pubmed: 18236473
Methods. 2015 Jul 1;82:55-63
pubmed: 25979346
Proc Natl Acad Sci U S A. 2017 Jun 6;114(23):6016-6021
pubmed: 28533407
Nat Chem Biol. 2016 Dec;12(12):1111-1118
pubmed: 27775714
FASEB J. 2014 Sep;28(9):4036-43
pubmed: 24891522
Sci Rep. 2017 Sep 18;7(1):11772
pubmed: 28924147
Cytometry A. 2015 Jul;87(7):636-45
pubmed: 25573116
Nature. 2015 Feb 26;518(7540):542-6
pubmed: 25686605
Genes Dev. 1999 Jan 1;13(1):76-86
pubmed: 9887101
Cell. 2019 Aug 8;178(4):807-819.e21
pubmed: 31398338
Cell Death Dis. 2017 Jun 1;8(6):e2841
pubmed: 28569786
Nat Rev Immunol. 2012 Feb 17;12(3):191-200
pubmed: 22343568
Mol Cancer Res. 2020 Dec;18(12):1777-1788
pubmed: 32855269
Vet Pathol. 2010 May;47(3):434-45
pubmed: 20472805
Anal Chem. 2008 Apr 1;80(7):2539-47
pubmed: 18318509
Front Immunol. 2019 Sep 06;10:2101
pubmed: 31555293
Methods Mol Biol. 2015;1346:99-113
pubmed: 26542718
J Immunol. 2008 Dec 1;181(11):7507-13
pubmed: 19017940
Nat Methods. 2017 Mar;14(3):275-278
pubmed: 28135256
Mol Cell. 2009 Oct 9;36(1):131-40
pubmed: 19818716
EMBO J. 2017 Aug 15;36(16):2353-2372
pubmed: 28701484
J Biol Chem. 2002 Oct 25;277(43):41038-45
pubmed: 12192000
J Biol Chem. 2003 Feb 14;278(7):4536-41
pubmed: 12446695
Nat Methods. 2017 Oct;14(10):959-962
pubmed: 28846090
J Immunol. 2012 Feb 15;188(4):1630-7
pubmed: 22250088
Mediators Inflamm. 2017;2017:9247574
pubmed: 28607536
Exp Hematol. 2021 Feb;94:37-46
pubmed: 33346030
Trends Immunol. 2020 Feb;41(2):126-140
pubmed: 31928914
Biomed Res Int. 2015;2015:347571
pubmed: 25789315
Cancer Immunol Res. 2019 Jan;7(1):86-99
pubmed: 30413431
Nat Cell Biol. 2013 Mar;15(3):309-16
pubmed: 23434824
Cancer Sci. 2019 Apr;110(4):1317-1330
pubmed: 30767320
Blood. 2014 Mar 13;123(11):1720-8
pubmed: 24478402
J Vis Exp. 2019 Jan 4;(143):
pubmed: 30663710
Proc Natl Acad Sci U S A. 2004 Jun 29;101(26):9751-6
pubmed: 15210949
Nat Methods. 2017 Jul;14(7):707-709
pubmed: 28504682
Blood. 2011 Dec 15;118(25):6572-9
pubmed: 22039262