Evidence for conservation of a primordial 12-hour ultradian gene program in humans.


Journal

bioRxiv : the preprint server for biology
Titre abrégé: bioRxiv
Pays: United States
ID NLM: 101680187

Informations de publication

Date de publication:
02 May 2023
Historique:
pubmed: 19 5 2023
medline: 19 5 2023
entrez: 19 5 2023
Statut: epublish

Résumé

While circadian rhythms are entrained to the once daily light-dark cycle of the sun, many marine organisms exhibit ~12h ultradian rhythms corresponding to the twice daily movement of the tides. Although human ancestors emerged from circatidal environment millions of years ago, direct evidence of the existence of ~12h ultradian rhythms in humans are lacking. Here, we performed prospective, temporal transcriptome profiling of peripheral white blood cells and identified robust ~12h transcriptional rhythms from three healthy subjects. Pathway analysis implicated ~12h rhythms effecting RNA and protein metabolism, with strong homology to the circatidal gene programs previously identified in

Identifiants

pubmed: 37205600
doi: 10.1101/2023.05.02.539021
pmc: PMC10187241
pii:
doi:

Types de publication

Preprint

Langues

eng

Subventions

Organisme : NIGMS NIH HHS
ID : DP2 GM140924
Pays : United States
Organisme : NIA NIH HHS
ID : R21 AG071893
Pays : United States

Déclaration de conflit d'intérêts

Competing interests: The authors declare no competing interests.

Auteurs

Bokai Zhu (B)

Aging Institute of UPMC, University of Pittsburgh School of Medicine; Pittsburgh, Pennsylvania, USA.
Pittsburgh Liver Research Center, University of Pittsburgh; Pittsburgh, Pennsylvania, USA.
Division of Endocrinology and Metabolism, Department of Medicine, University of Pittsburgh School of Medicine; Pittsburgh, Pennsylvania, USA.

Silvia Liu (S)

Pittsburgh Liver Research Center, University of Pittsburgh; Pittsburgh, Pennsylvania, USA.
Department of Pathology, University of Pittsburgh School of Medicine; Pittsburgh, Pennsylvania, USA.

Natalie L David (NL)

Aging Institute of UPMC, University of Pittsburgh School of Medicine; Pittsburgh, Pennsylvania, USA.
Neuroendocrinology Unit, Division of Endocrinology and Metabolism, Department of Medicine, University of Pittsburgh School of Medicine; Pittsburgh, Pennsylvania, USA.
Center for Human Integrative Physiology, University of Pittsburgh School of Medicine; Pittsburgh, Pennsylvania, USA.

William Dion (W)

Aging Institute of UPMC, University of Pittsburgh School of Medicine; Pittsburgh, Pennsylvania, USA.

Nandini K Doshi (NK)

Aging Institute of UPMC, University of Pittsburgh School of Medicine; Pittsburgh, Pennsylvania, USA.
Center for Human Integrative Physiology, University of Pittsburgh School of Medicine; Pittsburgh, Pennsylvania, USA.

Lauren B Siegel (LB)

Neuroendocrinology Unit, Division of Endocrinology and Metabolism, Department of Medicine, University of Pittsburgh School of Medicine; Pittsburgh, Pennsylvania, USA.

Tânia Amorim (T)

Aging Institute of UPMC, University of Pittsburgh School of Medicine; Pittsburgh, Pennsylvania, USA.
Neuroendocrinology Unit, Division of Endocrinology and Metabolism, Department of Medicine, University of Pittsburgh School of Medicine; Pittsburgh, Pennsylvania, USA.
Center for Human Integrative Physiology, University of Pittsburgh School of Medicine; Pittsburgh, Pennsylvania, USA.

Rosemary E Andrews (RE)

Aging Institute of UPMC, University of Pittsburgh School of Medicine; Pittsburgh, Pennsylvania, USA.
Center for Human Integrative Physiology, University of Pittsburgh School of Medicine; Pittsburgh, Pennsylvania, USA.

Gv Naveen Kumar (GN)

Aging Institute of UPMC, University of Pittsburgh School of Medicine; Pittsburgh, Pennsylvania, USA.

Saad Irfan (S)

Aging Institute of UPMC, University of Pittsburgh School of Medicine; Pittsburgh, Pennsylvania, USA.

Tristan Pesaresi (T)

Aging Institute of UPMC, University of Pittsburgh School of Medicine; Pittsburgh, Pennsylvania, USA.
Center for Human Integrative Physiology, University of Pittsburgh School of Medicine; Pittsburgh, Pennsylvania, USA.

Ankit X Sharma (AX)

Aging Institute of UPMC, University of Pittsburgh School of Medicine; Pittsburgh, Pennsylvania, USA.

Michelle Sun (M)

Aging Institute of UPMC, University of Pittsburgh School of Medicine; Pittsburgh, Pennsylvania, USA.

Pouneh K Fazeli (PK)

Neuroendocrinology Unit, Division of Endocrinology and Metabolism, Department of Medicine, University of Pittsburgh School of Medicine; Pittsburgh, Pennsylvania, USA.
Center for Human Integrative Physiology, University of Pittsburgh School of Medicine; Pittsburgh, Pennsylvania, USA.

Matthew L Steinhauser (ML)

Aging Institute of UPMC, University of Pittsburgh School of Medicine; Pittsburgh, Pennsylvania, USA.
Center for Human Integrative Physiology, University of Pittsburgh School of Medicine; Pittsburgh, Pennsylvania, USA.
Division of Cardiology, Department of Medicine, University of Pittsburgh School of Medicine; Pittsburgh, Pennsylvania, USA.

Classifications MeSH