The Crown Pearl V2: an improved genome assembly of the European freshwater pearl mussel
Journal
GigaByte (Hong Kong, China)
ISSN: 2709-4715
Titre abrégé: GigaByte
Pays: China
ID NLM: 101775049
Informations de publication
Date de publication:
2023
2023
Historique:
received:
09
02
2023
accepted:
10
05
2023
medline:
19
5
2023
pubmed:
19
5
2023
entrez:
19
5
2023
Statut:
epublish
Résumé
Contiguous assemblies are fundamental to deciphering the composition of extant genomes. In molluscs, this is considerably challenging owing to the large size of their genomes, heterozygosity, and widespread repetitive content. Consequently, long-read sequencing technologies are fundamental for high contiguity and quality. The first genome assembly of
Identifiants
pubmed: 37207176
doi: 10.46471/gigabyte.81
pii: 81
pmc: PMC10189783
doi:
Types de publication
Journal Article
Langues
eng
Pagination
gigabyte81Informations de copyright
© The Author(s) 2023.
Déclaration de conflit d'intérêts
The authors declare that they have no competing interests.
Références
Genome Biol Evol. 2021 Mar 1;13(3):
pubmed: 33570560
Mob DNA. 2015 Jun 02;6:11
pubmed: 26045719
Evol Lett. 2021 May 07;5(3):196-213
pubmed: 34136269
Biol Rev Camb Philos Soc. 2017 Feb;92(1):572-607
pubmed: 26727244
Proc Biol Sci. 2015 Feb 22;282(1801):20142332
pubmed: 25589608
Mol Phylogenet Evol. 2018 Oct;127:98-118
pubmed: 29729933
DNA Res. 2021 May 2;28(2):
pubmed: 33755103
Mol Biol Evol. 2021 Sep 27;38(10):4647-4654
pubmed: 34320186
Nat Rev Genet. 2016 May 17;17(6):333-51
pubmed: 27184599
Nat Commun. 2020 Mar 18;11(1):1432
pubmed: 32188846
NAR Genom Bioinform. 2021 Jan 06;3(1):lqaa108
pubmed: 33575650
Evol Dev. 2020 Nov;22(6):409-424
pubmed: 32291964
Bioinformatics. 2013 Apr 15;29(8):1072-5
pubmed: 23422339
Nat Rev Genet. 2018 Jun;19(6):329-346
pubmed: 29599501
Nat Methods. 2015 Apr;12(4):357-60
pubmed: 25751142
Mol Ecol. 2021 Mar;30(5):1155-1173
pubmed: 33382161
Genome Biol Evol. 2018 Jul 1;10(7):1637-1646
pubmed: 29878181
PLoS Biol. 2022 Oct 17;20(10):e3001801
pubmed: 36251637
Nucleic Acids Res. 2007 Jan;35(Database issue):D61-5
pubmed: 17130148
Bioinformatics. 2014 Aug 1;30(15):2114-20
pubmed: 24695404
Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W116-20
pubmed: 15980438
Environ Sci Pollut Res Int. 2017 Dec;24(35):27145-27159
pubmed: 28963680
Sci Data. 2022 Aug 13;9(1):494
pubmed: 35963883
Nature. 2021 Apr;592(7856):737-746
pubmed: 33911273
Brief Funct Genomics. 2019 Nov 19;18(6):377-394
pubmed: 31609407
Bioinformatics. 2017 Feb 15;33(4):574-576
pubmed: 27797770
Sci Rep. 2022 Oct 7;12(1):16894
pubmed: 36207367
Bioinformatics. 2020 Apr 1;36(7):2253-2255
pubmed: 31778144
Nat Methods. 2015 Jan;12(1):59-60
pubmed: 25402007
Science. 2022 Jul 22;377(6604):364-366
pubmed: 35862547