Isothermal titration calorimetry binding properties of Cibacron Blue F3GA in complex with human serum albumin.
HSA-Ligand interactions
human serum albumin
in silico docking
isothermal titration calorimetry
Journal
Journal of molecular recognition : JMR
ISSN: 1099-1352
Titre abrégé: J Mol Recognit
Pays: England
ID NLM: 9004580
Informations de publication
Date de publication:
08 2023
08 2023
Historique:
revised:
09
05
2023
received:
16
08
2022
accepted:
10
05
2023
medline:
24
7
2023
pubmed:
23
5
2023
entrez:
23
5
2023
Statut:
ppublish
Résumé
Binding interactions between Cibacron Blue-F3GA (CB-F3GA) and human serum albumin (HSA, at physiologically ten-fold lower concentration) was studied by isothermal titration calorimetry (ITC) and in-silico docking computations. ITC experiments revealed two separate binding sites on HSA with different binding affinities for CB-F3GA. The high-affinity binding site (PBS-II) on HSA binds CB-F3GA at nanomolar scale (K
Substances chimiques
Serum Albumin, Human
ZIF514RVZR
Cibacron Blue F 3GA
5DV0L8V99J
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
e3040Informations de copyright
© 2023 John Wiley & Sons Ltd.
Références
Björhall K, Miliotis T, Davidsson P. Comparison of different depletion strategies for improved resolution in proteomic analysis of human serum samples. Proteomics. 2005;5(1):307-317. doi:10.1002/pmic.200400900
Steel LF, Trotter MG, Nakajima PB, Mattu TS, Gonye G, Block T. Efficient and specific removal of albumin from human serum samples. Mol Cell Proteomics. 2003;2(4):262-270. doi:10.1074/mcp.M300026-MCP200
Andac CA, Andac M, Denizli A. Predicting the binding properties of cibacron blue F3GA in affinity separation systems. Int J Biol Macromol. 2007;41(4):430-438. doi:10.1016/j.ijbiomac.2007.06.008
Gianazza E, Arnaud P. Chromatography of plasma proteins on immobilized Cibacron blue F3-GA. Mechanism of the molecular interaction. Biochem J. 1982;203(3):637-641. doi:10.1042/bj2030637
Andac M, Galaev I, Denizli A. Dye attached poly(hydroxyethyl methacrylate) cryogel for albumin depletion from human serum. J Sep Sci. 2012;35(9):1173-1182. doi:10.1002/jssc.201101020
Compagnini A, Fisichella S, Foti S, Maccarrone G, Saletti R. Isolation by gel-permeation chromatography of a non-covalent complex of Cibacron blue F3G-A with human serum albumin. J Chromatogr A. 1996;736(1-2):115-123. doi:10.1016/0021-9673(95)01362-8
Dockal M, Carter DC, Rüker F. The three recombinant domains of human serum albumin. Structural characterization and ligand binding properties. J Biol Chem. 1999;274(41):29303-29310. doi:10.1074/jbc.274.41.29303
Leatherbarrow RJ, Dean PD. Studies on the mechanism of binding of serum albumins to immobilized cibacron blue F3G a. Biochem J. 1980;189(1):27-34. doi:10.1042/bj1890027
Sereikaite J. Bovine serum albumin-dye binding. 15(January):298.
Kılıç S, Andac M, Denizli A. Binding modes of cibacron blue with albumin in affinity chromatography using docking tools. Int J Biol Macromol. 2021;183:110-118. doi:10.1016/j.ijbiomac.2021.04.142
Esfahlan AJ, Roufegarinejad L, Tabibiazar M, Lorenzo JM, Amarowicz R. Exploring the interactions between Caffeic acid and human serum albumin using spectroscopic and molecular docking techniques. Pol J Food Nutr Sci. 2021;71(1):69-77. doi:10.31883/pjfns/133203
Zaman F, Beezer AE, Mitchell JC, et al. The stability of benzoyl peroxide by isothermal microcalorimetry. Int J Pharmaceutics. 2001;277:133-137.
Ghai R, Falconer RJ, Collins BM. Applications of isothermal titration calorimetry in pure and applied research-survey of the literature from 2010. J Mol Recognit. 2012;25(1):32-52. doi:10.1002/jmr.1167
Hanwell MD, Curtis DE, Lonie DC, Vandermeersch T, Zurek E, Hutchison GR. Capillary surfaces with free boundary in a wedge. J Chem. 2012;4(17):1-17. doi:10.1016/j.aim.2014.05.019
Morris GM, Huey R, Lindstrom W, et al. A graphical user Interface for computational chemistry Softwares. J Comput Chem. 2009;16:2785-2791. doi:10.1002/jcc.21256
Eberhardt J, Santos-Martins D, Tillack AF, Forli S. AutoDock Vina 1.2.0: new docking methods, expanded force field, and python bindings. J Chem Inf Model. 2021;61(8):3891-3898. doi:10.1021/acs.jcim.1c00203
Trott O, Olson AJ. AutoDock Vina: improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading. J Comput Chem. 2009;32:461. doi:10.1002/jcc.21334
Pettersen EF, Goddard TD, Huang CC, et al. UCSF chimera-a visualization system for exploratory research and analysis. J Comput Chem. 2004;25(13):1605-1612. doi:10.1002/jcc.20084
Le VH, Buscaglia R, Chaires JB, Lewis EA. Modeling complex equilibria in ITC experiments: thermodynamic parameters estimation for a three binding site model. Anal Biochem. 2013;434:233-241. doi:10.1016/j.ab.2012.11.030
Seal P, Sikdar J, Roy A, Haldar R. Binding of ibuprofen to human hemoglobin: elucidation of their molecular recognition by spectroscopy, calorimetry, and molecular modeling techniques. J Biomol Struct Dyn. 2018;36(12):3137-3154. doi:10.1080/07391102.2017.1384399
Chubarov A, Spitsyna A, Krumkacheva O, et al. Reversible dimerization of human serum albumin. Molecules. 2021;26(1):1-12. doi:10.3390/molecules26010108
Roland Z, Jerome B, Francoise B, Jean-Paul T, Bernard S. Evidence for a concentration-dependent polymerization of a commercial human serum albumin. J Chromatogr A. 1981;216:191-198.
Darcel CLQ. On the heterogeneity of serum albumin: effect of sodium dodecyl sulphate on agarose chromatography of the protein. Int J Biochem. 1987;19(2):213-216. doi:10.1016/0020-711X(87)90336-3
Atmeh RF, Arafa IM, Al-Khateeb M. Albumin aggregates: hydrodynamic shape and Physico-chemical properties. Jordan J Chem. 2007;2(2):169-182.
Farrugia A. Concerning Chapter 5-Human Albumin; in Cross-Sectional Guidelines for Therapy with Blood Components and Plasma Derivatives, 4th ed. Transfus Med Hemother 2009;36(6):399-407. Transfus Med Hemother. 2010;37(2):98-99. 10.1159/000293349. Epub 2010 Mar 15. PMID: 21048816; PMCID: PMC2914418.
Ghuman J, Zunszain PA, Petitpas I, Bhattacharya AA, Otagiri M, Curry S. Structural basis of the drug-binding specificity of human serum albumin. J Mol Biol. 2005;353(1):38-52. doi:10.1016/j.jmb.2005.07.075