Perenniality, more than genotypes, shapes biological and chemical rhizosphere composition of perennial wheat lines.
metagenomics
microbial biodiversity
perennial grains
rhizosphere environment
soil enzymomics
soil lipidomics
soil metabolomics
Journal
Frontiers in plant science
ISSN: 1664-462X
Titre abrégé: Front Plant Sci
Pays: Switzerland
ID NLM: 101568200
Informations de publication
Date de publication:
2023
2023
Historique:
received:
23
02
2023
accepted:
06
04
2023
medline:
24
5
2023
pubmed:
24
5
2023
entrez:
24
5
2023
Statut:
epublish
Résumé
Perennial grains provide various ecosystem services compared to the annual counterparts thanks to their extensive root system and permanent soil cover. However, little is known about the evolution and diversification of perennial grains rhizosphere and its ecological functions over time. In this study, a suite of -OMICSs - metagenomics, enzymomics, metabolomics and lipidomics - was used to compare the rhizosphere environment of four perennial wheat lines at the first and fourth year of growth in comparison with an annual durum wheat cultivar and the parental species
Identifiants
pubmed: 37223792
doi: 10.3389/fpls.2023.1172857
pmc: PMC10200949
doi:
Types de publication
Journal Article
Langues
eng
Pagination
1172857Informations de copyright
Copyright © 2023 Bertola, Righetti, Gazza, Ferrarini, Fornasier, Cirlini, Lolli, Galaverna and Visioli.
Déclaration de conflit d'intérêts
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
Références
Anal Chem. 2016 Nov 15;88(22):11084-11091
pubmed: 27768289
PLoS Biol. 2017 Sep 22;15(9):e2002860
pubmed: 28938018
Appl Environ Microbiol. 2010 Jun;76(11):3685-91
pubmed: 20382808
Front Plant Sci. 2019 Feb 21;10:157
pubmed: 30881364
J Agric Food Chem. 2021 Dec 1;69(47):14092-14102
pubmed: 34793147
Microorganisms. 2021 Jun 28;9(7):
pubmed: 34203506
Sci Total Environ. 2020 Sep 15;735:139572
pubmed: 32480142
Proc Natl Acad Sci U S A. 2021 Jun 22;118(25):
pubmed: 34161254
Trends Plant Sci. 2022 Feb;27(2):180-190
pubmed: 34620547
PLoS One. 2018 Feb 15;13(2):e0192953
pubmed: 29447262
Nat Commun. 2018 Jul 16;9(1):2738
pubmed: 30013066
Methods Mol Biol. 2020;2104:337-360
pubmed: 31953825
J Agric Food Chem. 2018 Sep 26;66(38):9895-9906
pubmed: 30179002
PLoS One. 2015 Jul 30;10(7):e0134345
pubmed: 26226508
Sci Rep. 2019 Oct 30;9(1):15611
pubmed: 31666614
Curr Res Microb Sci. 2021 Nov 24;2:100084
pubmed: 34917993
Metabolomics. 2007 Sep;3(3):211-221
pubmed: 24039616
Biotechnol Lett. 2008 Jun;30(6):967-77
pubmed: 18227974
Science. 2004 Jun 11;304(5677):1629-33
pubmed: 15192218
Environ Microbiol. 2013 Mar;15(3):928-42
pubmed: 22891790
Front Microbiol. 2021 Apr 14;12:651282
pubmed: 33936009
Appl Microbiol Biotechnol. 2002 Dec;60(4):367-76
pubmed: 12466875
Sci Rep. 2022 Jan 20;12(1):1081
pubmed: 35058538
Cell Rep. 2021 Jul 27;36(4):109449
pubmed: 34320359
Proc Natl Acad Sci U S A. 1999 Feb 16;96(4):1463-8
pubmed: 9990046
Trends Plant Sci. 2016 Jun;21(6):486-497
pubmed: 26850794
FEMS Microbiol Ecol. 2020 Jun 1;96(6):
pubmed: 32275297
Front Microbiol. 2021 Apr 20;12:645893
pubmed: 33959108
New Phytol. 2021 Oct;232(2):776-787
pubmed: 34235741
Plant Physiol. 2003 Apr;131(4):1748-55
pubmed: 12692333
Plant Signal Behav. 2009 Feb;4(2):94-9
pubmed: 19649180
Antonie Van Leeuwenhoek. 2002 Aug;81(1-4):557-64
pubmed: 12448751
J Hazard Mater. 2021 Jan 15;402:123829
pubmed: 33254810
ISME J. 2016 Nov;10(11):2593-2604
pubmed: 27168143
Annu Rev Plant Biol. 2006;57:233-66
pubmed: 16669762
Curr Protoc Microbiol. 2012 Nov;Chapter 1:Unit 1E.5.
pubmed: 23184592
Sci Rep. 2019 Feb 8;9(1):1669
pubmed: 30737459
Science. 2010 Jun 25;328(5986):1638-9
pubmed: 20576874
J Vis Exp. 2018 Jul 24;(137):
pubmed: 30102263
Ecotoxicol Environ Saf. 2018 Dec 15;165:52-60
pubmed: 30193164
Appl Environ Microbiol. 2020 Feb 18;86(5):
pubmed: 31862727