Genomic epidemiology of
bovine tuberculosis
genome sequencing
transmission dynamics
Journal
Microbial genomics
ISSN: 2057-5858
Titre abrégé: Microb Genom
Pays: England
ID NLM: 101671820
Informations de publication
Date de publication:
05 2023
05 2023
Historique:
medline:
29
5
2023
pubmed:
25
5
2023
entrez:
25
5
2023
Statut:
ppublish
Résumé
Bovine tuberculosis (bTB) is a costly, epidemiologically complex, multi-host, endemic disease. Lack of understanding of transmission dynamics may undermine eradication efforts. Pathogen whole-genome sequencing improves epidemiological inferences, providing a means to determine the relative importance of inter- and intra-species host transmission for disease persistence. We sequenced an exceptional data set of 619
Identifiants
pubmed: 37227264
doi: 10.1099/mgen.0.001023
pmc: PMC10272874
doi:
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Subventions
Organisme : Biotechnology and Biological Sciences Research Council
ID : BB/P0105598
Pays : United Kingdom
Organisme : Biotechnology and Biological Sciences Research Council
ID : BB/M01262X
Pays : United Kingdom
Références
Mol Biol Evol. 2017 Apr 1;34(4):997-1007
pubmed: 28100788
Syst Biol. 2005 Apr;54(2):241-53
pubmed: 16012095
BMC Vet Res. 2009 Nov 17;5:42
pubmed: 19919697
Infect Genet Evol. 2012 Jun;12(4):873-6
pubmed: 21855653
Microb Genom. 2020 Aug;6(8):
pubmed: 32553050
Epidemiol Infect. 2021 May 07;149:e125
pubmed: 33958017
Res Vet Sci. 2020 Jun;130:170-178
pubmed: 32197169
Viruses. 2022 Jul 27;14(8):
pubmed: 36016270
EBioMedicine. 2018 Nov;37:410-416
pubmed: 30341041
Vet Rec. 2021 Sep;189(5):e248
pubmed: 33870503
Front Vet Sci. 2018 Jun 05;5:109
pubmed: 29951489
Trends Ecol Evol. 2015 Jun;30(6):306-13
pubmed: 25887947
Proc Natl Acad Sci U S A. 2014 Jun 24;111(25):9193-8
pubmed: 24927589
Lancet Infect Dis. 2013 Feb;13(2):137-46
pubmed: 23158499
Front Vet Sci. 2018 Oct 26;5:259
pubmed: 30417002
Vet Rec. 2005 Oct 22;157(17):501-4
pubmed: 16244231
BMC Genomics. 2017 Feb 16;18(1):180
pubmed: 28209138
Vet Rec. 2010 Oct 30;167(18):684-9
pubmed: 21257483
Genetics. 1943 Mar;28(2):114-38
pubmed: 17247074
Syst Biol. 2018 Sep 1;67(5):901-904
pubmed: 29718447
Sci Rep. 2015 Jul 07;5:11861
pubmed: 26148538
Methods Mol Med. 2001;54:165-203
pubmed: 21341076
Front Public Health. 2022 Jan 13;9:790544
pubmed: 35096744
Mol Biol Evol. 2010 Sep;27(9):2038-51
pubmed: 20363828
Bioinformatics. 2014 May 1;30(9):1312-3
pubmed: 24451623
J Clin Microbiol. 1997 Apr;35(4):907-14
pubmed: 9157152
Rev Sci Tech. 2016 Apr;35(1):241-58
pubmed: 27217181
Vet Rec. 2018 Mar 3;182(9):259
pubmed: 29273602
Bioinformatics. 2019 Feb 1;35(3):526-528
pubmed: 30016406
Elife. 2019 Dec 17;8:
pubmed: 31843054
PLoS Curr. 2013 Oct 10;5:
pubmed: 24761309
PLoS Pathog. 2021 Nov 29;17(11):e1010075
pubmed: 34843579
Syst Biol. 2019 Mar 1;68(2):219-233
pubmed: 29961836
PLoS One. 2011;6(7):e22751
pubmed: 21799941
Lancet Infect Dis. 2013 Feb;13(2):130-6
pubmed: 23158674
Mol Ecol Resour. 2017 Jul;17(4):608-613
pubmed: 27717245
PLoS One. 2021 Jan 28;16(1):e0246141
pubmed: 33508004
PLoS Comput Biol. 2014 Apr 10;10(4):e1003537
pubmed: 24722319
Mol Ecol. 2019 May;28(9):2192-2205
pubmed: 30807679
Microb Genom. 2023 May;9(5):
pubmed: 37227264
Epidemiol Infect. 2013 Jul;141(7):1445-56
pubmed: 23537573
Vet J. 2002 Mar;163(2):115-27
pubmed: 12093187
Nat Methods. 2012 Mar 04;9(4):357-9
pubmed: 22388286
Ecol Evol. 2018 Sep 12;8(20):10233-10246
pubmed: 30397461
BMC Microbiol. 2019 Jul 5;19(1):154
pubmed: 31277578
Mol Ecol. 2010 Sep;19(17):3515-31
pubmed: 20618897
Genetics. 2009 Dec;183(4):1421-30
pubmed: 19797047
Mol Biol Evol. 2016 Aug;33(8):2102-16
pubmed: 27189573
Virus Evol. 2016 Apr 09;2(1):vew007
pubmed: 27774300
Infect Immun. 2005 Oct;73(10):6467-71
pubmed: 16177318
Infect Genet Evol. 2013 Dec;20:8-15
pubmed: 23933404
Bioinformatics. 2011 Feb 15;27(4):592-3
pubmed: 21169378
Genome Announc. 2017 Apr 6;5(14):
pubmed: 28385856
Bioinformatics. 2009 Aug 15;25(16):2078-9
pubmed: 19505943
Vet Microbiol. 2006 Feb 25;112(2-4):231-7
pubmed: 16326042
Epidemics. 2018 Jun;23:110-120
pubmed: 29415865
Infect Genet Evol. 2020 Apr;79:104131
pubmed: 31786341
PLoS Pathog. 2012;8(11):e1003008
pubmed: 23209404
Res Vet Sci. 2006 Oct;81(2):190-210
pubmed: 16513150