Double Thionated Pyrimidine Nucleobases: Molecular Tools with Tunable Photoproperties.


Journal

Journal of the American Chemical Society
ISSN: 1520-5126
Titre abrégé: J Am Chem Soc
Pays: United States
ID NLM: 7503056

Informations de publication

Date de publication:
07 Jun 2023
Historique:
medline: 25 5 2023
pubmed: 25 5 2023
entrez: 25 5 2023
Statut: ppublish

Résumé

Sulfur-substituted nucleobases are DNA and RNA base derivatives that exhibit extremely efficient photoinduced intersystem crossing (ISC) dynamics into the lowest-energy triplet state. The long-lived and reactive triplet states of sulfur-substituted nucleobases are crucial due to their wide range of potential applications in medicine, structural biology, and the development of organic light-emitting diodes (OLEDs) and other emerging technologies. However, a comprehensive understanding of non-negligible wavelength-dependent changes in the internal conversion (IC) and ISC events is still lacking. Here, we study the underlying mechanism using joint experimental gas-phase time-resolved photoelectron spectroscopy (TRPES) and theoretical quantum chemistry methods. We combine 2,4-dithiouracil (2,4-DTU) TRPES experimental data with computational analysis of the different photodecay processes, which are induced by increasing excitation energies along the entire linear absorption (LA) ultraviolet (UV) spectrum. Our results show how the double-thionated uracil (U), i.e., 2,4-DTU, appears as a versatile photoactivatable instrument. Multiple decay processes can be initiated with different ISC rates or triplet-state lifetimes that resemble the distinctive behavior of the singly substituted 2- or 4-thiouracil (2-TU or 4-TU). We obtained a clear partition of the LA spectrum based on the dominant photoinduced process. Our work clarifies the reasons behind the wavelength-dependent changes in the IC, ISC, and triplet-state lifetimes in doubly thionated U, becoming a biological system of utmost importance for wavelength-controlled applications. These mechanistic details and photoproperties are transferable to closely related molecular systems such as thionated thymines.

Identifiants

pubmed: 37227292
doi: 10.1021/jacs.2c12061
pmc: PMC10251510
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

11945-11958

Références

Molecules. 2018 Nov 01;23(11):
pubmed: 30388739
J Phys Chem A. 2022 Nov 10;126(44):8211-8217
pubmed: 36318646
Br J Cancer. 2011 Jun 7;104(12):1869-76
pubmed: 21610703
Phys Chem Chem Phys. 2016 Jul 27;18(30):20168-76
pubmed: 27189184
Curr Biol. 2001 Jul 24;11(14):1142-6
pubmed: 11509240
Phys Chem Chem Phys. 2019 Apr 21;21(15):8152-8160
pubmed: 30933211
J Chem Phys. 2014 Jul 28;141(4):044314
pubmed: 25084917
J Phys Chem Lett. 2014 Aug 7;5(15):2682-7
pubmed: 26277963
Chem Rev. 2018 Aug 8;118(15):6975-7025
pubmed: 29558159
Phys Chem Chem Phys. 2015 Nov 7;17(41):27851-61
pubmed: 26439833
Chem Sci. 2020 Sep 22;11(41):11113-11123
pubmed: 34094354
J Chem Phys. 2020 Jun 7;152(21):214117
pubmed: 32505150
Photochem Photobiol Sci. 2012 Jan;11(1):62-8
pubmed: 21860872
Chem Commun (Camb). 2012 Jul 7;48(53):6675-7
pubmed: 22641010
Photochem Photobiol. 2019 Jan;95(1):33-58
pubmed: 29978490
J Mol Model. 2018 Sep 3;24(9):271
pubmed: 30178229
Angew Chem Int Ed Engl. 2013 Dec 9;52(50):13449-52
pubmed: 24307019
J Chem Phys. 2015 Nov 7;143(17):175103
pubmed: 26547183
J Chem Theory Comput. 2021 Aug 10;17(8):4639-4647
pubmed: 34114454
J Chem Theory Comput. 2019 Nov 12;15(11):5925-5964
pubmed: 31509407
J Phys Chem A. 2010 Oct 28;114(42):11225-30
pubmed: 20961159
Phys Chem Chem Phys. 2014 Mar 14;16(10):4740-51
pubmed: 24469462
Am J Hum Genet. 1998 Jul;63(1):11-6
pubmed: 9634537
J Chem Theory Comput. 2022 May 10;18(5):3075-3088
pubmed: 35476905
Chemistry. 2020 Jan 2;26(1):336-343
pubmed: 31750960
J Phys Chem A. 2014 Oct 9;118(40):9438-44
pubmed: 25189271
J Am Chem Soc. 2014 Dec 31;136(52):17930-3
pubmed: 25506742
Nat Commun. 2016 Oct 05;7:13077
pubmed: 27703148
J Chem Phys. 2016 Feb 21;144(7):074303
pubmed: 26896982
J Phys Chem A. 2008 Aug 7;112(31):7286-95
pubmed: 18636693
Chemphyschem. 2009 Jan 12;10(1):101-10
pubmed: 19009581
J Dermatolog Treat. 2013 Jun;24(3):209-14
pubmed: 22007698
Angew Chem Int Ed Engl. 2010 Oct 11;49(42):7714-7
pubmed: 20836107
Photochem Photobiol Sci. 2017 Sep 13;16(9):1415-1423
pubmed: 28745752
Chem Sci. 2017 Feb 1;8(2):1482-1499
pubmed: 28572908
J Phys Chem Lett. 2021 Dec 30;12(51):12300-12309
pubmed: 34931839
J Phys Chem Lett. 2014 Feb 6;5(3):560-5
pubmed: 26276609
Top Curr Chem. 2015;355:245-327
pubmed: 25238718
J Phys Chem B. 2007 May 17;111(19):5518-24
pubmed: 17439266
Phys Chem Chem Phys. 2017 Aug 2;19(30):19756-19766
pubmed: 28630971
Phys Chem Chem Phys. 2020 May 21;22(19):10924-10933
pubmed: 32373808
J Phys Chem A. 2016 Aug 18;120(32):6342-50
pubmed: 27454198
Annu Rev Phys Chem. 2009;60:217-39
pubmed: 19012538
J Phys Chem A. 2007 Aug 30;111(34):8500-8
pubmed: 17685594
J Am Chem Soc. 2018 Nov 28;140(47):16087-16093
pubmed: 30380844
Phys Chem Chem Phys. 2022 Sep 21;24(36):21750-21758
pubmed: 36094295
Chem Rev. 2004 Apr;104(4):1977-2019
pubmed: 15080719
Phys Chem Chem Phys. 2017 Mar 15;19(11):7689-7698
pubmed: 28256672
Phys Chem Chem Phys. 2020 Jul 21;22(27):15608-15615
pubmed: 32613978
J Phys Chem Lett. 2016 Jun 2;7(11):1978-83
pubmed: 27167106
Chemistry. 2017 Feb 21;23(11):2619-2627
pubmed: 27911037
J Phys Chem A. 2019 Dec 26;123(51):10862-10867
pubmed: 31790228
J Phys Chem A. 2015 Sep 10;119(36):9524-33
pubmed: 26284285
Nat Rev Cancer. 2008 Jan;8(1):24-36
pubmed: 18097462
J Chem Theory Comput. 2013 Feb 12;9(2):1132-43
pubmed: 26588756

Auteurs

Abed Mohamadzade (A)

Department of Physics and Astronomy, University of Georgia, Athens, Georgia 30602, United States.

Artur Nenov (A)

Dipartimento di Chimica Industriale "Toso Montanari", Università di Bologna, 40136 Bologna, Italy.

Marco Garavelli (M)

Dipartimento di Chimica Industriale "Toso Montanari", Università di Bologna, 40136 Bologna, Italy.

Irene Conti (I)

Dipartimento di Chimica Industriale "Toso Montanari", Università di Bologna, 40136 Bologna, Italy.

Susanne Ullrich (S)

Department of Physics and Astronomy, University of Georgia, Athens, Georgia 30602, United States.

Classifications MeSH