POLCOVID: a multicenter multiclass chest X-ray database (Poland, 2020-2021).


Journal

Scientific data
ISSN: 2052-4463
Titre abrégé: Sci Data
Pays: England
ID NLM: 101640192

Informations de publication

Date de publication:
02 06 2023
Historique:
received: 16 02 2023
accepted: 11 05 2023
medline: 5 6 2023
pubmed: 3 6 2023
entrez: 2 6 2023
Statut: epublish

Résumé

The outbreak of the SARS-CoV-2 pandemic has put healthcare systems worldwide to their limits, resulting in increased waiting time for diagnosis and required medical assistance. With chest radiographs (CXR) being one of the most common COVID-19 diagnosis methods, many artificial intelligence tools for image-based COVID-19 detection have been developed, often trained on a small number of images from COVID-19-positive patients. Thus, the need for high-quality and well-annotated CXR image databases increased. This paper introduces POLCOVID dataset, containing chest X-ray (CXR) images of patients with COVID-19 or other-type pneumonia, and healthy individuals gathered from 15 Polish hospitals. The original radiographs are accompanied by the preprocessed images limited to the lung area and the corresponding lung masks obtained with the segmentation model. Moreover, the manually created lung masks are provided for a part of POLCOVID dataset and the other four publicly available CXR image collections. POLCOVID dataset can help in pneumonia or COVID-19 diagnosis, while the set of matched images and lung masks may serve for the development of lung segmentation solutions.

Identifiants

pubmed: 37268643
doi: 10.1038/s41597-023-02229-5
pii: 10.1038/s41597-023-02229-5
pmc: PMC10236395
doi:

Types de publication

Dataset Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

348

Subventions

Organisme : Narodowe Centrum Nauki (National Science Centre)
ID : MNiSW/2/WFSN/2020
Organisme : Narodowe Centrum Nauki (National Science Centre)
ID : MNiSW/2/WFSN/2020
Organisme : Narodowe Centrum Nauki (National Science Centre)
ID : MNiSW/2/WFSN/2020
Organisme : Narodowe Centrum Nauki (National Science Centre)
ID : MNiSW/2/WFSN/2020
Organisme : Narodowe Centrum Nauki (National Science Centre)
ID : MNiSW/2/WFSN/2020
Organisme : Narodowe Centrum Nauki (National Science Centre)
ID : MNiSW/2/WFSN/2020
Organisme : Narodowe Centrum Nauki (National Science Centre)
ID : MNiSW/2/WFSN/2020
Organisme : Narodowe Centrum Nauki (National Science Centre)
ID : MNiSW/2/WFSN/2020
Organisme : Narodowe Centrum Nauki (National Science Centre)
ID : MNiSW/2/WFSN/2020
Organisme : Narodowe Centrum Nauki (National Science Centre)
ID : MNiSW/2/WFSN/2020
Organisme : Narodowe Centrum Nauki (National Science Centre)
ID : MNiSW/2/WFSN/2020
Organisme : Narodowe Centrum Nauki (National Science Centre)
ID : MNiSW/2/WFSN/2020
Organisme : Narodowe Centrum Nauki (National Science Centre)
ID : MNiSW/2/WFSN/2020
Organisme : Narodowe Centrum Nauki (National Science Centre)
ID : MNiSW/2/WFSN/2020
Organisme : Narodowe Centrum Nauki (National Science Centre)
ID : MNiSW/2/WFSN/2020
Organisme : Narodowe Centrum Nauki (National Science Centre)
ID : MNiSW/2/WFSN/2020
Organisme : Narodowe Centrum Nauki (National Science Centre)
ID : MNiSW/2/WFSN/2020
Organisme : Narodowe Centrum Nauki (National Science Centre)
ID : MNiSW/2/WFSN/2020
Organisme : Narodowe Centrum Nauki (National Science Centre)
ID : MNiSW/2/WFSN/2020
Organisme : Narodowe Centrum Nauki (National Science Centre)
ID : MNiSW/2/WFSN/2020
Organisme : Narodowe Centrum Nauki (National Science Centre)
ID : MNiSW/2/WFSN/2020
Organisme : Narodowe Centrum Nauki (National Science Centre)
ID : MNiSW/2/WFSN/2020
Organisme : Politechnika lska (Silesian University of Technology)
ID : 02/070/BK_22/0033
Organisme : Politechnika lska (Silesian University of Technology)
ID : 02/070/BK_22/0033
Organisme : Ministry of Science and Higher Education | Narodowe Centrum Badań i Rozwoju (National Centre for Research and Development)
ID : POIG.02.03.01-24-099/13
Organisme : Ministry of Science and Higher Education | Narodowe Centrum Badań i Rozwoju (National Centre for Research and Development)
ID : POIG.02.03.01-24-099/13
Organisme : Ministry of Science and Higher Education | Narodowe Centrum Badań i Rozwoju (National Centre for Research and Development)
ID : POIG.02.03.01-24-099/13
Organisme : Ministry of Science and Higher Education | Narodowe Centrum Badań i Rozwoju (National Centre for Research and Development)
ID : POIG.02.03.01-24-099/13
Organisme : Ministry of Science and Higher Education | Narodowe Centrum Badań i Rozwoju (National Centre for Research and Development)
ID : POIG.02.03.01-24-099/13
Organisme : Ministry of Science and Higher Education | Narodowe Centrum Badań i Rozwoju (National Centre for Research and Development)
ID : POIG.02.03.01-24-099/13
Organisme : Ministry of Science and Higher Education | Narodowe Centrum Badań i Rozwoju (National Centre for Research and Development)
ID : POIG.02.03.01-24-099/13
Organisme : EC | Directorate-General for Employment, Social Affairs and Inclusion | European Social Fund (Fondo Social Europeo)
ID : POWR.03.05.00-00-Z305
Organisme : EC | Directorate-General for Employment, Social Affairs and Inclusion | European Social Fund (Fondo Social Europeo)
ID : POWR.03.02.00-00-I029
Organisme : EC | Directorate-General for Employment, Social Affairs and Inclusion | European Social Fund (Fondo Social Europeo)
ID : POWR.03.05.00-00-Z305

Investigateurs

Agnieszka Oronowicz-Jaskowiak (A)
Bogumil Golebiewski (B)
Mateusz Rataj (M)
Przemyslaw Chmielarz (P)
Adrianna Tur (A)
Grzegorz Drabik (G)
Justyna Kozub (J)
Anna Kozanecka (A)
Sebastian Hildebrandt (S)
Katarzyna Krutul-Walenciej (K)
None Jan Baron
Jerzy Jaroszewicz (J)
Piotr Wasilewski (P)
Samuel Mazur (S)
Krzysztof Klaude (K)
Katarzyna Rataj (K)
Bogumil Golebiewski (B)
Piotr Rabiko (P)
Pawel Rajewski (P)
Piotr Blewaska (P)
Katarzyna Sznajder (K)
Robert Plesniak (R)

Informations de copyright

© 2023. The Author(s).

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Auteurs

Aleksandra Suwalska (A)

Department of Data Science and Engineering, Silesian University of Technology, Gliwice, Poland.

Joanna Tobiasz (J)

Department of Data Science and Engineering, Silesian University of Technology, Gliwice, Poland.
Department of Computer Graphics, Vision and Digital Systems, Silesian University of Technology, Gliwice, Poland.

Wojciech Prazuch (W)

Department of Data Science and Engineering, Silesian University of Technology, Gliwice, Poland.

Marek Socha (M)

Department of Data Science and Engineering, Silesian University of Technology, Gliwice, Poland.

Pawel Foszner (P)

Department of Data Science and Engineering, Silesian University of Technology, Gliwice, Poland.
Department of Computer Graphics, Vision and Digital Systems, Silesian University of Technology, Gliwice, Poland.

Damian Piotrowski (D)

Department of Infectious Diseases and Hepatology, Medical University of Silesia, Katowice, Poland.

Katarzyna Gruszczynska (K)

Department of Radiology and Nuclear Medicine, Medical University of Silesia, Katowice, Poland.

Magdalena Sliwinska (M)

Department of Diagnostic Imaging, Voivodship Specialist Hospital, Wroclaw, Poland.

Jerzy Walecki (J)

Department of Diagnostic Radiology, Central Clinical Hospital of the Ministry of Internal Affairs and Administration, Warsaw, Poland.

Tadeusz Popiela (T)

Department of Radiology, Jagiellonian University Medical College, Krakow, Poland.

Grzegorz Przybylski (G)

Department of Lung Diseases, Cancer and Tuberculosis, Kujawsko-Pomorskie Pulmonology Center, Bydgoszcz, Poland.

Mateusz Nowak (M)

Department of Radiology, Silesian Hospital, Cieszyn, Poland.

Piotr Fiedor (P)

Department of General and Transplantation Surgery, Medical University of Warsaw, Warsaw, Poland.

Malgorzata Pawlowska (M)

Department of Infectious Diseases and Hepatology, Collegium Medicum in Bydgoszcz, Nicolaus Copernicus University, Torun, Poland.

Robert Flisiak (R)

Department of Infectious Diseases and Hepatology, Medical University of Bialystok, Bialystok, Poland.

Krzysztof Simon (K)

Department of Infectious Diseases and Hepatology, Wroclaw Medical University, Wroclaw, Poland.

Gabriela Zapolska (G)

Department of Radiology, Czerniakowski Hospital, Warsaw, Poland.

Barbara Gizycka (B)

Department of Imaging Diagnostics, MEGREZ Hospital, Tychy, Poland.

Edyta Szurowska (E)

2nd Department of Radiology, Medical University of Gdansk, Gdansk, Poland.

Michal Marczyk (M)

Department of Data Science and Engineering, Silesian University of Technology, Gliwice, Poland. michal.marczyk@polsl.pl.
Yale Cancer Center, Yale School of Medicine, New Haven, CT, USA. michal.marczyk@polsl.pl.

Andrzej Cieszanowski (A)

Department of Radiology I, The Maria Sklodowska-Curie National Research Institute of Oncology, Warsaw, Poland. acieszanowski@wum.edu.pl.

Joanna Polanska (J)

Department of Data Science and Engineering, Silesian University of Technology, Gliwice, Poland.

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