From vision toward best practices: Evaluating

NAMs benchmark dose (BMD) modeling chemical safety in vitro to in vivo extrapolation (IVIVE) new approach methods transcriptomics

Journal

Frontiers in toxicology
ISSN: 2673-3080
Titre abrégé: Front Toxicol
Pays: Switzerland
ID NLM: 101777990

Informations de publication

Date de publication:
2023
Historique:
received: 27 03 2023
accepted: 03 05 2023
medline: 8 6 2023
pubmed: 8 6 2023
entrez: 8 6 2023
Statut: epublish

Résumé

The growing number of chemicals in the current consumer and industrial markets presents a major challenge for regulatory programs faced with the need to assess the potential risks they pose to human and ecological health. The increasing demand for hazard and risk assessment of chemicals currently exceeds the capacity to produce the toxicity data necessary for regulatory decision making, and the applied data is commonly generated using traditional approaches with animal models that have limited context in terms of human relevance. This scenario provides the opportunity to implement novel, more efficient strategies for risk assessment purposes. This study aims to increase confidence in the implementation of new approach methods in a risk assessment context by using a parallel analysis to identify data gaps in current experimental designs, reveal the limitations of common approaches deriving transcriptomic points of departure, and demonstrate the strengths in using high-throughput transcriptomics (HTTr) to derive practical endpoints. A uniform workflow was applied across six curated gene expression datasets from concentration-response studies containing 117 diverse chemicals, three cell types, and a range of exposure durations, to determine tPODs based on gene expression profiles. After benchmark concentration modeling, a range of approaches was used to determine consistent and reliable tPODs. High-throughput toxicokinetics were employed to translate

Identifiants

pubmed: 37288009
doi: 10.3389/ftox.2023.1194895
pii: 1194895
pmc: PMC10242042
doi:

Types de publication

Journal Article

Langues

eng

Pagination

1194895

Informations de copyright

Copyright © 2023 Reardon, Farmahin, Williams, Meier, Addicks, Yauk, Matteo, Atlas, Harrill, Everett, Shah, Judson, Ramaiahgari, Ferguson and Barton-Maclaren.

Déclaration de conflit d'intérêts

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

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Auteurs

Anthony J F Reardon (AJF)

Existing Substances Risk Assessment Bureau, Healthy Environments and Consumer Safety Branch, Health Canada, Ottawa, ON, Canada.

Reza Farmahin (R)

Existing Substances Risk Assessment Bureau, Healthy Environments and Consumer Safety Branch, Health Canada, Ottawa, ON, Canada.

Andrew Williams (A)

Environmental Health Science and Research Bureau, Healthy Environments and Consumer Safety Branch, Health Canada, Ottawa, ON, Canada.

Matthew J Meier (MJ)

Environmental Health Science and Research Bureau, Healthy Environments and Consumer Safety Branch, Health Canada, Ottawa, ON, Canada.

Gregory C Addicks (GC)

Environmental Health Science and Research Bureau, Healthy Environments and Consumer Safety Branch, Health Canada, Ottawa, ON, Canada.

Carole L Yauk (CL)

Department of Biology, University of Ottawa, Ottawa, ON, Canada.

Geronimo Matteo (G)

Department of Biology, University of Ottawa, Ottawa, ON, Canada.

Ella Atlas (E)

Environmental Health Science and Research Bureau, Healthy Environments and Consumer Safety Branch, Health Canada, Ottawa, ON, Canada.
Department of Biochemistry, University of Ottawa, Ottawa, ON, Canada.

Joshua Harrill (J)

Center for Computational Toxicology and Exposure, US Environmental Protection Agency, Durham, NC, United States.

Logan J Everett (LJ)

Center for Computational Toxicology and Exposure, US Environmental Protection Agency, Durham, NC, United States.

Imran Shah (I)

Center for Computational Toxicology and Exposure, US Environmental Protection Agency, Durham, NC, United States.

Richard Judson (R)

Center for Computational Toxicology and Exposure, US Environmental Protection Agency, Durham, NC, United States.

Sreenivasa Ramaiahgari (S)

Division of Translational Toxicology, Mechanistic Toxicology Branch, National Institute of Environmental Health Sciences, National Institutes of Health, Durham, NC, United States.

Stephen S Ferguson (SS)

Division of Translational Toxicology, Mechanistic Toxicology Branch, National Institute of Environmental Health Sciences, National Institutes of Health, Durham, NC, United States.

Tara S Barton-Maclaren (TS)

Existing Substances Risk Assessment Bureau, Healthy Environments and Consumer Safety Branch, Health Canada, Ottawa, ON, Canada.

Classifications MeSH