Impact of variability in cell cycle periodicity on cell population dynamics.


Journal

PLoS computational biology
ISSN: 1553-7358
Titre abrégé: PLoS Comput Biol
Pays: United States
ID NLM: 101238922

Informations de publication

Date de publication:
Jun 2023
Historique:
received: 16 12 2022
accepted: 06 04 2023
revised: 30 06 2023
medline: 3 7 2023
pubmed: 20 6 2023
entrez: 20 6 2023
Statut: epublish

Résumé

The cell cycle consists of a series of orchestrated events controlled by molecular sensing and feedback networks that ultimately drive the duplication of total DNA and the subsequent division of a single parent cell into two daughter cells. The ability to block the cell cycle and synchronize cells within the same phase has helped understand factors that control cell cycle progression and the properties of each individual phase. Intriguingly, when cells are released from a synchronized state, they do not maintain synchronized cell division and rapidly become asynchronous. The rate and factors that control cellular desynchronization remain largely unknown. In this study, using a combination of experiments and simulations, we investigate the desynchronization properties in cervical cancer cells (HeLa) starting from the G1/S boundary following double-thymidine block. Propidium iodide (PI) DNA staining was used to perform flow cytometry cell cycle analysis at regular 8 hour intervals, and a custom auto-similarity function to assess the desynchronization and quantify the convergence to an asynchronous state. In parallel, we developed a single-cell phenomenological model the returns the DNA amount across the cell cycle stages and fitted the parameters using experimental data. Simulations of population of cells reveal that the cell cycle desynchronization rate is primarily sensitive to the variability of cell cycle duration within a population. To validate the model prediction, we introduced lipopolysaccharide (LPS) to increase cell cycle noise. Indeed, we observed an increase in cell cycle variability under LPS stimulation in HeLa cells, accompanied with an enhanced rate of cell cycle desynchronization. Our results show that the desynchronization rate of artificially synchronized in-phase cell populations can be used a proxy of the degree of variance in cell cycle periodicity, an underexplored axis in cell cycle research.

Identifiants

pubmed: 37339124
doi: 10.1371/journal.pcbi.1011080
pii: PCOMPBIOL-D-22-01856
pmc: PMC10313040
doi:

Substances chimiques

Lipopolysaccharides 0
DNA 9007-49-2

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

e1011080

Informations de copyright

Copyright: This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 public domain dedication.

Déclaration de conflit d'intérêts

The authors have declared that no competing interests exist.

Références

Chaos. 2004 Sep;14(3):653-61
pubmed: 15446975
Nat Rev Genet. 2005 Jun;6(6):451-64
pubmed: 15883588
Bio Protoc. 2018 Sep 5;8(17):
pubmed: 30263905
Front Bioeng Biotechnol. 2020 Jun 11;8:249
pubmed: 32596213
Mol Cell Biol. 1997 Nov;17(11):6526-36
pubmed: 9343416
Science. 2002 Aug 16;297(5584):1183-6
pubmed: 12183631
Elife. 2016 May 17;5:
pubmed: 27185527
Methods. 2007 Feb;41(2):143-50
pubmed: 17189856
Oncotarget. 2014 Oct 30;5(20):9727-43
pubmed: 25179302
Sci Rep. 2022 Nov 24;12(1):20302
pubmed: 36434030
Bioengineered. 2021 Dec;12(1):4995-5003
pubmed: 34369271
Cancer Res. 1968 Sep;28(9):1815-20
pubmed: 4877741
Cytometry. 1980 Jul;1(1):71-7
pubmed: 7023881
Mol Cell. 2009 Jun 12;34(5):591-602
pubmed: 19524538
Sci Rep. 2016 Dec 22;6:39519
pubmed: 28004761
J Biol Chem. 1973 Jun 10;248(11):3904-9
pubmed: 4736079
Nat Rev Mol Cell Biol. 2020 Feb;21(2):67-84
pubmed: 31768006
Trends Cancer. 2019 Aug;5(8):475-494
pubmed: 31421905
Ultrason Sonochem. 2019 May;53:178-186
pubmed: 30642802
PLoS Biol. 2010 Sep 21;8(9):
pubmed: 20877711
Biochem Soc Trans. 2014 Feb;42(1):76-81
pubmed: 24450631
Proc Natl Acad Sci U S A. 1974 Apr;71(4):1286-90
pubmed: 4524638
Proc Natl Acad Sci U S A. 1985 Aug;82(16):5365-9
pubmed: 3860868
Mol Syst Biol. 2019 Mar 18;15(3):e8604
pubmed: 30886052
NPJ Syst Biol Appl. 2020 Mar 27;6(1):7
pubmed: 32221305
iScience. 2020 Sep 21;23(10):101595
pubmed: 33083753
Mol Syst Biol. 2011 Aug 02;7:519
pubmed: 21811230
J Cell Biol. 1974 Feb;60(2):523-7
pubmed: 4855906
J Cell Physiol. 1971 Oct;78(2):161-70
pubmed: 5167847
Science. 2004 Jun 18;304(5678):1811-4
pubmed: 15166317
Nucleic Acids Res. 2020 Sep 18;48(16):9406-9413
pubmed: 32810265
PLoS Comput Biol. 2019 Mar 15;15(3):e1006402
pubmed: 30875364
Mol Cell. 2006 Dec 28;24(6):853-65
pubmed: 17189188
Nat Commun. 2016 May 03;7:11246
pubmed: 27138336
Cell. 2011 Aug 19;146(4):633-44
pubmed: 21854987
Semin Immunol. 2014 Jun;26(3):253-66
pubmed: 24958609
Inflammation. 2015 Feb;38(1):400-8
pubmed: 25348861
Trends Cell Biol. 2014 Feb;24(2):90-9
pubmed: 23916625
Science. 2014 Jun 20;344(6190):1392-6
pubmed: 24903562
J Membr Biol. 2014 Jul;247(7):591-9
pubmed: 24878539
Biotechniques. 2001 Jun;30(6):1322-6, 1328, 1330-1
pubmed: 11414226
Mol Syst Biol. 2013 Jun 04;9:670
pubmed: 23736683
J Immunol Methods. 1987 Feb 26;97(1):111-7
pubmed: 3819434
J Theor Biol. 2001 Jan 21;208(2):185-99
pubmed: 11162063
Cytometry. 1987 Jan;8(1):1-8
pubmed: 3803091
Mol Syst Biol. 2014 Jun 21;10:732
pubmed: 24952590
Cell Rep. 2020 Jun 23;31(12):107804
pubmed: 32579930
Proc Natl Acad Sci U S A. 2002 Oct 1;99(20):12795-800
pubmed: 12237400
Nat Commun. 2019 Jun 24;10(1):2766
pubmed: 31235692
Tumour Biol. 2017 Jun;39(6):1010428317710586
pubmed: 28653898
Int J Med Sci. 2021 Jan 1;18(4):1030-1038
pubmed: 33456361

Auteurs

Chance M Nowak (CM)

Bioengineering Department, The University of Texas at Dallas, Richardson, Texas, United States of America.
Center for Systems Biology, The University of Texas at Dallas, Richardson, Texas, United States of America.
Department of Biological Sciences, The University of Texas at Dallas, Richardson, Texas, United States of America.

Tyler Quarton (T)

Bioengineering Department, The University of Texas at Dallas, Richardson, Texas, United States of America.
Center for Systems Biology, The University of Texas at Dallas, Richardson, Texas, United States of America.

Leonidas Bleris (L)

Bioengineering Department, The University of Texas at Dallas, Richardson, Texas, United States of America.
Center for Systems Biology, The University of Texas at Dallas, Richardson, Texas, United States of America.
Department of Biological Sciences, The University of Texas at Dallas, Richardson, Texas, United States of America.

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