Introgression between highly divergent fungal sister species.

Trichaptum ABBA-BABA demographic modelling experimental system ghost introgression population genomics

Journal

Journal of evolutionary biology
ISSN: 1420-9101
Titre abrégé: J Evol Biol
Pays: Switzerland
ID NLM: 8809954

Informations de publication

Date de publication:
08 2023
Historique:
revised: 15 05 2023
received: 24 11 2022
accepted: 17 05 2023
medline: 10 8 2023
pubmed: 26 6 2023
entrez: 26 6 2023
Statut: ppublish

Résumé

To understand how species evolve and adapt to changing environments, it is important to study gene flow and introgression due to their influence on speciation and radiation events. Here, we apply a novel experimental system for investigating these mechanisms using natural populations. The system is based on two fungal sister species with morphological and ecological similarities occurring in overlapping habitats. We examined introgression between these species by conducting whole genome sequencing of individuals from populations in North America and Europe. We assessed genome-wide nucleotide divergence and performed crossing experiments to study reproductive barriers. We further used ABBA-BABA statistics together with a network analysis to investigate introgression, and conducted demographic modelling to gain insight into divergence times and introgression events. The results revealed that the species are highly divergent and incompatible in vitro. Despite this, small regions of introgression were scattered throughout the genomes and one introgression event likely involves a ghost population (extant or extinct). This study demonstrates that introgression can be found among divergent species and that population histories can be studied without collections of all the populations involved. Moreover, the experimental system is shown to be a useful tool for research on reproductive isolation in natural populations.

Identifiants

pubmed: 37363874
doi: 10.1111/jeb.14190
doi:

Banques de données

Dryad
['10.5061/dryad.fxpnvx0t4', '10.5061/dryad.xpnvx0kkz']

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

1133-1149

Informations de copyright

© 2023 The Authors. Journal of Evolutionary Biology published by John Wiley & Sons Ltd on behalf of European Society for Evolutionary Biology.

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Auteurs

Vilde Bruhn Kinneberg (VB)

Section for Genetics and Evolutionary Biology, Department of Biosciences, University of Oslo, Oslo, Norway.
Evolution and Paleobiology, Natural History Museum, University of Oslo, Oslo, Norway.

Dabao Sun Lü (DS)

Section for Genetics and Evolutionary Biology, Department of Biosciences, University of Oslo, Oslo, Norway.

David Peris (D)

Section for Genetics and Evolutionary Biology, Department of Biosciences, University of Oslo, Oslo, Norway.
Department of Food Biotechnology, Institute of Agrochemistry and Food Technology (IATA), CSIC, Valencia, Spain.

Mark Ravinet (M)

School of Life Sciences, University of Nottingham, Nottingham, UK.

Inger Skrede (I)

Section for Genetics and Evolutionary Biology, Department of Biosciences, University of Oslo, Oslo, Norway.

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